RnoINT0049251 @ rn6
Intron Retention
Gene
ENSRNOG00000004171 | Dnah9
Description
dynein, axonemal, heavy chain 9 [Source:RGD Symbol;Acc:621799]
Coordinates
chr10:52580689-52592952:-
Coord C1 exon
chr10:52592792-52592952
Coord A exon
chr10:52580846-52592791
Coord C2 exon
chr10:52580689-52580845
Length
11946 bp
Sequences
Splice sites
5' ss Seq
TAGGTATGT
5' ss Score
7.76
3' ss Seq
CTCCCTCCTGTGTTTTGCAGGTG
3' ss Score
12.94
Exon sequences
Seq C1 exon
GTTGACAATGCCCAGGCTTTCCTCTGGCTGTCACAGCTACGCCATCGTTGGGATGATGAGGCCAAGCACTGCTTTGCTAACATCTGCGATGCCCAGTTTCTATATTCCTATGAGTACCTGGGAAATACCCCTCGCCTGGTGATCACGCCTTTGACTGATAG
Seq A exon
GTATGTGCTGTGGCCAGCTACTGATTGGTCTCTGTTTCTGGACAGGCTAACCAGTAGTCATCCACAATCAAGGTCATCATAATTTGCTGTCTGTTTACATAACTTCAGGAGAGAGAATCTTGTTTTCAGTATTCAAGAGAGCATATTCTCTACCCATCACCCTAGCTCATAAATGAATGAACTCAGGCTGCACATGGCAGCCACAAAACAAAACTATAAAGAATGCAAAGTGGTCTTCTCAGAACAAGCATCAGAGCCAGTCTATGAACTGTAGCTTTCTTGAGGAATTGTTGAGGCCATGAGGTACCCAACAATAGATCCAATACATGCTAGCTGCTTACCCACACCAAAAGTGACCTCACATTTGATCTTCCTAACTTATATCAAGAGGAGGTAGTAATGCACATGATCCCCCCACCACAACTCCTGAGGATAAGACAGTAATTCTATAGAGAAGTTATGAGGCCGGGGAATATCTCAGGTGGTAAAGTGCTCACCGTGCAAACATGAGGCCCTGAGTTCGTCCCCAGTTCTCATGTTTAAAAGTACATATGCATTCTCAACTGGGACATGTATTCACCTCTCATCCTCAGAATAAAAACCTGTAAGGAACATACTAGCAACCATTAAGGTATTTTCAATGTTTCAAGAGAGCATATTCTCTACCCTTCACCTTAGTTTCATAAATGAATGAAATCAGGCCTCACACTGAGCTGCTCACTGACATTTCCAGATGACTAAAATATTCTCTACCCTTAAATACCAATCCTAGTGAGAAGAAGGTAAACACATGCAGATAAAAATTTAACTAGAACAAGGGGCAGGGAGAAAGTGCTAGGCCTTAGACTCGACTAAGGCTCAAAGCCATTGGCTGTGAATTTCCAGGGATGGGACACAGAGTGTACCCTCTGAGCACAGAGGATCCCATCAAAGCAGGAAGAAAATGCCTAGAAGTTTTTGAGCAACAATAAAAATCAAGTGCCTGGATCTTCAGGGCCTGCTGGACCCGGGGGGAGACTGTCAGGGTGGTCATCCTGCAAAATCTGTGTCTGTACCACTCTTGCTGGCAAAAGGGACTCTAACATCTGTTTTGTTTCTCTGGATGTTTTAAGACAGCATCTCCCTGGAATGCACCATACAGTTCAGGTTGGCCCTGAATGTGTGATAATCTTTCCTCAAGCCCACACCACCACACAGCACATTTGTCAGTTGTCGCAGTAGATGTCCCCTCTCAACCCCCAGCCCCCGCCCAAGGGAAAGAACTATAGGTAATCATTACAGGAATGTCCCAAGCAAAGTCATGGAAATGAGAGACCTTGGAATGGATGTAGACTCCTGACTTTGGGAAAGGCTAGTCACTGCAGTCAGTCTAGGAATGTAAAAGATGTGTTCTTTATCCAATAAGTAATGATGAAAGTCATACTTACAAAATTTTATTCAGCAGTTAGAGTGGGCATGAAGAGAAGAGGGCATGGGGAAAATGTCATGAGATACAGTATTTTAGTTCTTCCCAAGTGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGCGCACGTGCAGAAGACATCCTTAAATATTATTCTTTAGGCATTTTCTACCTTTTTCCATTGTTTTGTTTTTGGATAGGGTCTCTCTCTGGCCTGGGAACTTGCCCAGTAGGCTAATCTAGCTGAGCAGCTCCAGGAATCCACCTACTTTGGTCTCCCTGGTCCTAGAGTTACAAGTACACACCTAGTTTTTTTTCTTTTTTCATGTGGAGTCTGAGGATTGAACTCAAGATGTTTAAAAATGCATGCAAGATAAGTACTTGTCTTAGCGTTTTATTGCTATAAAGAGACACCATGACTAAGGCAGCTCTTATAAAGGAAAACATTTCATTGGAGCTGGCTTACAGTTTCAGAGGTTTGGTCCATTATCATCATGCCAGGAAGCATGACAGACTGCAGGCAGACATGGTGCTGGATGAGCTGAGAGTTCTACATCTTGACCCAAAGACAACCAGGAGGAGGCTACAATGTTTTACACTGGGCAGTGCTTGAGCTTATATATTTCCTCAAAACCTTACCTCCACAGTAAAACACTTCCCCCAATAAGAATATACCTCCCCTAATAAGGCCACACCTCCTAATAGTGCCACTTCCCATGGGCCAAGCATATTTAAACCACCACAGTACTTTACCAACTGAGCCATCCCACCAGCCAGATAGCTGGTATCATCTGTCTTACAGTCAAATCCTCACACACATTTCCAAATATCGGATGAACATTTTCAAGTGACTTAAAGAAACCACTATTTATTGAACTGGGAATGTATAGATACCCAGCATCCTCTATGAATGAAGACATCTTGGCTTGTTTGCCTCCAGGTTTTCTACATCATTCATTCATTTTCAAACCCCGTTTGAAAAGTCCCTTACACCCAGACTCCCACTCGTCATTCCCTTTTTATTCCCATGACTCCTTTTCTGTGTGATCCTCATGAGACCGCATCCCTGATTTCATTAGCTCCCCACTGCACTCCAACTAAAGTCTAAAGTCCTTGCAGGACATGGTAATCCCTGCTGATGCCCCCTTCTCCTCCATCCCTGGTACTGTCTTCAAAACCTCCTTTCTACTCATCACCAGAGCTTCATTCCAATTTGGAATTTTGTGCTTGGGGTTTCTTCCTCCAGGCTGTCTATTCCATCATGGCTCCTAATCCTTCCCTGACTACCATGTCTAAGGAGCAGCCTCTTCCTGGTGATGTACACATACACCAGGCAGTCCTTACCAGTCTTTCTCCTAACTTGCCCTGCCTTCTGAAATGATCTATTTGTCTGTTTGCTTTCTCTCTGCGATCAGTGACTTGTGTCTGCCTTGGGTATAAGATCACCAGCACCTAGGAGCACTGAATGAGTGAATGAAGGCCAAAAGTGGAAGTTGCAATCCTAAGGACAGGCGGCATCAAGGACAGGCTGCATCAAGGAGAGGCTGACTTGGGCTTTTACTTGCACTGGGTTACCTCTGGGGCCCGTCCATTGTAAGATGAAGGGAATTTTTCACCAATTCAAGGTACATTAAGACTGGATTCTCCCAATCCTCTTTTCCAGTTGTGCTTCTCAGTCAGACATCCATCATTAGAAAGAAACCTGGCAGCACATTTCCTTTTACTGTGAGTTTTCTGGCTTGCCATGGAATATGAGCTAATAGTTAGGGAAATTATATCACTTGAAACAGTATAATGAAGCTATTACATGTTTGAGCAGTTTGGTTAATGTCTGTCTCCCACTCTAGAGGGCATGTCCTGTGATAGCCTTGACTTTGGTTTGCCCTGTTCTGTTCTCAGAACTTAACACTGTGTTCAGCCATAACAAGCACTCAGGAAGGACTCCCCAAATTCATGCAGGGAAATGAGGCCTGAGGCATGGATGCCATTTTCCCATAGCATCCAGAGTTTTGCTTTCTTTTCTTTCTGCTGACCCATCAGATATTTCAAGTCATAGGAACTATAGACTCCTATGTCTCTAGATCTTGGTACTTGTCTGAAAGCTGAAGAAAATAATTAGTACGTTGGGATTTAGATGACTCTGGTGCCCTAAGCCAAATGCCTGTGAGAGAGTGAGGAGAGTAGTTTGGCAATGAATTGTTTCTAAAACAGGCACTTATCCCCTCTTCTATGGAATATTGCAAATAACAACTCGAAAGAAGAATTTGCTGCAGATATTGGTAAGTGTGATACAAACCTTGAACTCATTTTGAACATTAAATGACTTTCTGACAGAGTATATGTAATTGAATATTTAAATAAGTTCCCCTTTCTCATTGATTTCCATTATTATCTCAAAAAATATTTTACTCAGTAAAAAAAGAAGAGAAGGAAGAGGAGGAAGAAGAGGAGGAGGAGGAGGAGGAAAAAGGGGAGGAGGAAGAAGAGGAGGAGGAGAAATAAAATTGGTCTTCATATAGGAAATCACATTTTAGAAAGCATTCAGACTTTACTTATGTGTGGCATCAGGACATTTAATTCGCTCCTGCCAGAAGAATTAATCAAACGAACAATTGATCCATACAACCTTTGCACATTCATTAAAAGCAACCCATGTACAGTACATCCGACTGATTGTTCCCATGCCCGTGTCTTTGGAATTTCCCACTGCCAGGATGGGACTTGAATATGTAAGTAGGCTCTGTCGATGCTGTCACGGGACTTAGGTACAGCTCTAAATTGAGGAACCAAAAGGAAATGTTTTCTCAGGCTGAACAAAAGCAATTCTTCTAGGCTGTCCCTTAGCCTTGGGTGAGCACTTTCTATTTCCCCTCCCATTTTCTTCCCTCCCCTTCACACACAAATGCCCCTTTCTGCTCTGTACTATATTAGGTAGTTTTAATCAGCTGCTTATCAATTTTGAGCACCTCTTAATTTCTCTGGAAAAACTGTACTTAGGTGAGATATAATTGATGCAAAAGTCTTTGAAGGTGATTTACTGGAAAAGGACAGAGCCAGCAACTCTCTGGAAGTTTTTCTTCAATATGTCTGTTAAAGGAAATCTAAAAACATTAGTAGTTAGAGAAGAGAAGCCAAATCACCCAGAGGTGACCTGTCACTGTTTGCCAACTTCTTTCTATGTGTGGGTTCTAAAAAGAGAAATTGAGATCATACTGTGAGCTGTTATGAGACATAGAGGATTTCTCATTTTACTTAACACAGTGTTGTAAAAACCTCTTCTCTGAACATGGCAGCCATTACCATCGTTCTCTGGTCAGCTTAATCACTTCTTGCAAGACACTCTGAGGCTCTGGTCTGGTGGCTTTGCCTTCTTGCTCCACCTCTGATCTAGATATTTGTAGTTCTTCCCCAACTGCCTATGACCCGTAAGGTGATGACACGTTTAGATTGTGAAAGGTTAACTTAAGGGGAGAGATTCTATCTATGTCACTCATAGAAGATGTTATCCATGCTGAGTTGAGACTCTCAAGTGGCCAGGCTACTTTACTCCTGTAAGTAATGTCTCACCCATGCTCTCTAAGTAAACTCAATACGTACATTGGTAGTACATAAGTACATAAGTAGTTTATGTAATGTAACCATGTGGTGGGACATTTTGGTTATAACAATAAAGCTTCATGAACCCCTCTGAATGTTCCTCCAAGGTTCTTATCATTTCCTGAGATGATAACGTTAAAAATAACCGAATGGTACAAACTTATACTTCATCATCTGTGTACGTGTGTGCACACAAACATGTATGGGTAGGTGCGCCTAGAGTCCTGAAGAGAGACTCAGGTCCCCTGCAGCTGGAGTTACAAGTAGCTGTAAGTCACATGACTTGACAAGGGTGCTTCTATCCTAATTCCTGTCTCCTGAAAGAGCATCAGGTTATTCTAGCCACTAAGCCATGTCTCCAGTACCCTGTTGGTTTTGTTTGTTGAAAATTAATGTCCCTACTCTCCCTGGTTTCTGAAAGTGTTCAGTGCAGGGCACATTAAATAGCTTTATATATTGCTTTAATGTCCCGATTCATTTTTCTGGTCACATATATCTCCTTTGGGTTTGGGCCTTAATTACTCCCAGGCTTCAGAGTCATGTGTTTATTGGCGATTGGATTTCCTTCCACTGAGGGTTACACTGTCACCACTCTGGTTCTTCACAAATTACTCTTAGGTTTAGAAAAGTTTCCATGGAAAGAGAAAGGTATTTACTTATACCTTTTGCTAGATTGTTTTAGTTTACTTTTTATTTAACCTCTTTGAGTCCTCCAGTAAATGTTTTGACTGTTGAAAATGGTGAGTCAAAATATTTTTTCATCGAACCATTTTTAATTACAAGTAATAGCAGCCCAAATTAAATCAACTTTGAATAAAAGAGGAAGTATTACACAAACCTGGGAACTGTGTCCATCTGGCAGGAACATGGTTAGCACTCAGCCCTAAACAAAAAAGACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCTCATGGACAGACAATGTTCTGTGCACTTAGATGGTAGCAGACACTTGGACTGTTTCCAGCTGTGGACATTATCACAATACTAATATGAACATTTTCATGCAAGTCTGGCTTGTGAATGTGGGTTTTGCTTGGATGGGGACCTATTAGGTCTTATGCTCTCTCATGCTTGACTTTGAGAAACTTCCTAATTGTTTTCCAAAATGGGCGTACTATTTTAGACTCTCACCAGCACTGAATCCTTGATGGTGGTGGTCATTGTTGACGTACTGTTGCAGCCATGGTGGTCAGTGTAGAGGGTTCTCTCATCCAGACTGTACTTTGCGTTTTCCATGTCAAGCAACTTTTAGCATGTACATTGCACTGTTCAAATTTCTTCTTCAGTACAATAACATCTGTTTGTGTTCTTTTGGAACTGTGGAGAGTCTTTGTATGCTCTGCTAGATTACATATATGCTTCCAGAGATGTTATCCTAGTTGGTGGTGTATCTTTTCATTTTCTTTATAGTATCTTTTGAAGTTCAAAGGTCTTGAATTTTGATGCAGTCTAATATTTAATGCTTGAGTGTTACTGTCTTTGTTTCTTTGCTTGCTTGATTTAAATTATCTTAATTTATTTTCTTTTGTGAGTATGGAAACTTTTACCAATTATCTTTTATTTTTCCCATTTAATGCCCAGATTTAGAAATTCCAAGCATTTTACTTGCAAGTATTTTGGGTTTTCTGTCATTTCTAGCATTTCTTTTCATACATGAGACTCAGAAGCCATGTGATTGTGTTGTTACCACTCAAAACTAGTTATAGGCACCCTACTCGTTATGCTAGAGAGATTGCCTCAGGGATACTTGGGCTGTTTGTGCCATTTCTTTGCATCATATATTGAGAGGATACTTCCTAGATAGTATAAGCAAAGAGAAAATGCACCCTAAACAGAAAGGACCTCATAACCTAAACAGACACAGAAGCATAGCCAGGTATGGTAAATATGAGACAATAAAATGTAAATGTTGGGCTGGGAACTTAGCTCAGTGGTAGAGCACTTGCCTAGCAAGCACAAGGCCCTGGGTTCAGTCCTCAGCTCCAAAAAAAAAAATGTAAATGTTATAATGGAAAAGGAAAATTTGTTCTAGATTGAAGTGGATGCCATTTTTCTTCCCTTAACACTGCCTTTTATGTTGTGGTTGGGACCTGTTAAAGTCTCTGACCCTTTTACATGGGCCTCCCTCTAACTACATTTCCCCAAGTTCTCTGTGTGTACAAGGGTTAGAGGACAACTTTGCATTTGTCTTTTTGAAGACAAACTTCTTCATATCTGGTGCATCATTTTTAATATTTCATTAATATTCCATACAATATTTTTTATCATATTCACCCTGAATCCTCCCTTTAGCTTCCTCCAGAGCCACTCCTTACCTCCCTAACCCACTCCCAACTTTGTGGGTTTTTTTAGAGCATCATTTTTAATTACTAAAAATGTTCAGAAATTTAGTCCTGGTTAAAACCAGTGGGTCACAAAGCAAAATGATGTGACTATGAGAAGAGGGCCTAGAGGAAAAAGGGACAGAGATGTGTGTGTTTGTGTGTGTGCGTGTGTGTGTGTGTGAGAGAGAGGGGGGGTGGGGGAGGGGAAGGAGAGAGAAAGGAGAAGAGAAGATAGGATGGGAAAAAATAGAATGCAGTATGCACGTGTATGAAACTGTCAAAGAACAAGTGAAACCAATGAAAAAGTTTTGTCTATCTTCTACATGATGAACCAATTCTTAATTCAAATTACCAATAGTGATATTATTGAATGTTGGGACAGCTGAGTTCTGGGCATATTGCTTGAGACCTCGCTCCAGGTAAAGACTGCTGTACCAGTTTGATCCCTCAGTTCTCACCATTGTAAAAGTCCCTGTTCTTTGAGTTGAGTGGAAATGATGACTATGCCGAGGTGTGTCACTCTGTGGTAGGTTAGTGAGCTTTCCGTCACTGTGACAACAACCAAATTGGAAGAAGAAAGATTTGTTTGGGCTTCTAGATTCAGGGGTTTTATTCTTCATCACCTGGACATGATGCTTTGGTCCTGTGACAGCACAGGGCATTGTGGTAGAAGAGCATGTTGGAGAGTGCCTCGTCGACTCATGGCAGAGCATCTCCCACAAGGAAGCAAGAGCAGATGGAAGTTGCTTGTGTGTTTAAAAAGATGGCTTAAGGAGGCCACAGGGCCTTCTAGAGTAGGTATCTGTCTGAAGGATGGGTACATGTGACTGGCTAGGTGGTTTGAGCATCTTGGCAGTGTCTGCTACAGCAGATGGCCTCTGCTTGCTTTGGGCTCTTCTTGTTGCCCATTCTAAAGTCCCTATTGATGGTGTTTTAGTTATTAGATCCAATCAGATGGCCCAGTTCCCCAACTGCTAAGCCCCAGCCTACCTTTTGTTAGAGATGTTAGATTTATTGACTTTGGAAACTTCTTTGGGTTCTGAGTTCTATTACTATGGATGGAAATAACAACATTTTGATATTCCCCAAGTGCCCAGAAACTCAGCATATCCTCAAAATAAGAGTGTCACCTAGTTCCAAATATTTCACTCAAATGAGTTCTTTGTTTCCAATGGGAATTCTGCTTTGTGAAACATTGCCTTTATAAACTTCCAAATTCTATGTGGATACTGCAACTCCAGAGCAAAGAGGCCAAGCCTGACTCGTCAGCTTTAGGAAGAGAGATATGAGACAGAAGGCGGTGGTGTGTATCTTAGTTAGGCTTCTGATAATTCAGGCTGATGCCTTTCCTCCTGTGTATGGAGTTTCGAACTTCAGTGACTGGGAGAGGTGGCAGCTATGGATCAGTATGGAACCAGAAACCAAGAGCTGAAGAAGCTAGATGTAGGGCTCTGTGAAGGGCTGGCTAGAGTAGCCAAATGGCAACAGGGGCCAAGAAAGATGATAAGAGGACCATTCAGCTTTTTACCTCAACCCTCATTTACTTCATCTTACTTCACAGTCCATCCAATGCTCAATGTCTGTCATCTTGCCCCATGGCCTGTATCATGTTCAATGTCCCAATTTGTCCATGGAAAGTAAGGTAAGCCAAGGAGCCTGCATGGCTAAAGGTTAAGGCTGAATGTAGCCCAAATCCCTGTGATCAGCTAAGTCAGTGCCCCGCATTTCACAAACAGATGAAATGATTCCAACCCACTTCTCTCTGCCCAAGGAGACTGGCCTCCTAGGTTTTACTCTGAGACTGAAACATAAATGGGAAATTGATTAGTGGAGAATACAGAAATATAAATGTTAGCCCCTTCAACACTATGTTGGTGCTGAACTCCATTCAACCAAGAAAGGCCTCTCACCATCTGGCAGGAAAGGAACTGACTCAGTTGCTGGTCACCCTGAAGCATCAGATACTAAACCAGGCAGATAATACTGGACACTGATTCTATCAGACAGACATCATGAGTAGAGTCTGTATTCATTTGCTAGGCATGAAAAAAAAGTTAGACCATTGATGCAATTTAACAGATTTATTGAGGTATACTTTTAGCGTTTTAAAGGGTATATAAACGTATCTTTTATGGCATTGTGGTAAATCCCTACTCCCACCCCAGGCCTTGGCAGCCATTGATCTAATGGCTGTCTCTATCGTTCATTTCTAGATGTTTCATACAATCGTTTTATCTGTCTTCTTCCACTTGTAGAACATGGCGATGATTCATCTGTTCTGTACTATGTTCACACCTCCGTTTCCTTCCTATTGTCCCAGGACTGGTCTGTTGCTTGGATACTGCATTTCATCTATCTATTGGCCATAGATAGGCATTTGAGTTTCACTTAGTTTTATTGATATGACTATCATGACCATGATTGAGTTCTATGAATGAGTGAACTTATTTTTCTTGGGGAAACTCCAAGGAAGGGAATTTCTGAATTATATGAAAAGCCCTTCTTTGAAGAAATGTTTAGCTGGTCTTTCAAAGTAAATGTATCATGTAACATTCCCACCAGCAACATATAAAGCTTTCTCTTGAATCCTTGCCATTATTTCTTATTGCTATATTCTGTATTGTAGACATCCTGGGTAATGTATCTTTTGTGGACTTTTTATCTAATGAGCACAACTAAATGAAACTATGAAAACTACGAATACTTTGAATACCTTAAATAATTGTGTGCTTGATGTGTGTATAGGAGGGGTGTAGTATGTGTATGTAGTAGTATGTATGCATACATCTATAGTATGTGAAGTGGAAATGTGTGTAAGTGCAGCATGTTGGGTATGTGTATTTTGTGTGTGTGTGTATGTGTACGTATGTGAGTGTGTATATGTGTGTGTTGCATGTATACATGGGTTCACATGCCATTGGGTAACATTGTTCCTTTATTTTAATGACAATGTCTCTCTTACTGAATGAACCTGGAGCACACCATTTCAGCCATACTGGCTGTCCAGGGAGTATGAAGGATCCTATGTCTCCATCTCCATAACCAATTCACACGTGTGCATGCATATACTACACAGTGCTTGGATTACAGGAATGTATCACCAATACCCAGATTTCACATGGGAACTGAGTATCTGCAGTTGGGTCCTCATGCTTGAGCAGCATAAGCACTTTACCACTGAACCATCTCCTCAGCTCCAACAATATTAATCTTAAAGCTGATGTTATGCTATTGTCATTAGTGAAGATAGTAATAAGAATACTAAATTAAATGATTACTTTTGGAATAAACCATTCATGTGCTTCTTAAAGAATCTCTGAGGGCTCGTATGTGCCTAGAGCTCTGCTGGGTCCTGAAGGTAAAGCAATGAACAAGAAAGTTGTGCATCCTAACTCCTATAAATGCGGATATGAGAAATCTGTGTGACATACATGGTGGGCATTAAGGTGGACAGAGTAGAACAGGGGCTCAGCTAAGCAGCTTCTTCTTACTCATCCCAGTCCTGCCGGGATTGGGGATACTTCATGCATAGACTAATGTCAACTCCTACCCAGAAGTTACTAGCTATTGCCTAGACAGATGGGAAATGAATATCACCTAGGTAGGCTCAAAGGGGTTGTTAGAGTGGGGAGGAGAAAGGGCCAACACAGTCTCAGAGCACTTGGAAAGCAAGGGTTGCTCTTCATAGCTTGTTGTTGGTGTGCTTTCGGAGAGAGCTTCAATGCAGCTAGAGTAGAACATGCAATCAAGGTTAAGATGGGCCAGTGAGGAGCCACAATGCCCTACGGGGAGGTTGTAATGGTAATTTTAAAAGGTATGTAGTTTTTCTACCCCCTGCTAGGTCCCAAATGAATAAGACTGAGGCTGATTTATTTAATTAAGCTTTACTGCATAATACCTGGGCAGTCATTGATCTATTTTAATCCTCTAAGATAATCTGACTACCCCTGCCCCCCAGCCAAAATCCCCAAGATTTTTACATTTTAGTATTGGTCTGGCTCTCTGGGCTTTAGTTGAATTTTCTTGTCCTCATAGTAGCTGGATCCCCCTTACTCTTTTCTCTCTTTTTCTCCCCTGGGTGGCAGAAGTCCCACCCAATTCTCTCTTCTGCCCAGTCATTGACTGATCAGCTTTTATTGGAAAGGCAGAGAATAAACGGTATACATTGTTTACACAAACTTGAAACAGGAGATATTTGGAATAAGCATTACAGTGCCTTGTCTGGATTGCAACAAGATAATCTTTACACAGTGCACAAAACCATTATGCATACAGGAGGCAGTCATGATCAGATTGGGTTGTTCTTTGGGAAGTTCAGGCTCTGTGGGGAACAGACAGGGGAGATGTTCTGGGTTTTCTTTCCTTGGTAGATGGTAAGTCAGGCCTATCTCTCCTTGAGCTTCCAACTCCCTGACACCCAGCAGAGCCATCAATGGCACAGGTAATAGAATTCTCCCTCCTGTGTTTTGCAG
Seq C2 exon
GTGCTACATCACTCTCACTCAGTCTCTACACTTGACCATGAGTGGGGCTCCAGCCGGACCTGCAGGCACAGGCAAGACAGAGACCACCAAGGACCTGGGCCGAGCACTGGGCATCATGGTCTATGTGTTTAACTGTTCCGAGCAGATGGACTACAAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSRNOG00000004171:ENSRNOT00000005583:26
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.151
Domain overlap (PFAM):
C1:
PF127742=AAA_6=PU(79.2=35.2)
A:
NA
C2:
PF127742=AAA_6=FE(22.5=100)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]