RnoINT0050537 @ rn6
Intron Retention
Gene
ENSRNOG00000038190 | Dok6
Description
docking protein 6 [Source:RGD Symbol;Acc:1564376]
Coordinates
chr18:86519575-86534790:-
Coord C1 exon
chr18:86534652-86534790
Coord A exon
chr18:86519693-86534651
Coord C2 exon
chr18:86519575-86519692
Length
14959 bp
Sequences
Splice sites
5' ss Seq
CGGGTAAGA
5' ss Score
9.84
3' ss Seq
ACCTTTTCCTTCTCTTTTAGCTT
3' ss Score
12.12
Exon sequences
Seq C1 exon
AATGTGTGACACAGGAGAAGGACTATTCACTTTTCAAACAAGGGAAGGAGAAATGATCTATCAGAAGGTCCACTCTGCAACACTGGCTATCGCTGAGCAACACGAAAGACTAATGCTAGAAATGGAGCAGAAAGCCCGG
Seq A exon
GTAAGAAGCCATCCTATGTAATCAATAAATATCCTAATGCTTGTGAATAAATATTCTAGTCCATTTGTCTAATATATAGTGCAAACCCATGCTCTGTCTCTGTTGTCAAACCTGTAAAGGACAATCTCAGCTCTGTAATACCATACATAGTTCAACACCAAAACAACTTTTTGGCTAGGACTTAGAAGCCTTGCTTTCCATAGATATGTATGTGACCTTGGTAACTCAAAGCTGTGTGGGTTGCTTGGAGAATGAGGCAAAAGTTGAACTTTGTTACTTATTCTTGTTCTAGGTGTGCAGATTAGCACAGAGGAATTTTAAGTATATTTTCATGAAAAACTGTCAAGAGTCATTTCAGTATACTACAATTATTGCCCATGAAACATGGCATCCTGTTTGGATTCCAAACCCTTGTTCAACAGACTGTACTCCTAGCCAGAATATTAAACCCCTAATATCCATTTAGCTGTCAGGCACATACACACCATTCATCTTATGATTGTGACAGAACATACAGGGTGTTTTTGAATACTTAGCTTCGAATGTCCGTGAAGAAAGCAAGATATTGAGCACAGATGTAGTGACTACTTATCACGCGTACTCTTTCAAAGATGTCTAACAATCTTGAGCTGTGTTTTATAAATAAAATTTCATTCACATCAGCTGGGGCTGCTGTGTTCTTATCACAGTCTGGACCAAACCTGGGGCAAGAGTCAGACAGTTATCCCTAAAACCTTAGAGATGACGGGTACCTGTACAAGGATCCCAGATACTCTAAAGTTGCGGTGCATTCCTGCTCTAAGAGGTTCGGGTGCTCAAACAATGGACTTTGTAAGGCTCAACAGTGGGATTCACCATTAAAATGTAAAGAGAAACATTTTGATAAATTCCATACAAATTTTGCAGATCTCTAAAGATTAATGCTAGTAAAATAAAAATACTTTCTAGTCCATTCTTCAAAATAAGCCAGTCTAACAATTTTATAAAAGCAGTCTACCTGAGCTTAATAATTTCTCAAAACACTAAGATTTGAAACCATGGAAGAAGTTTCCTCTCTCTTTTTTAATATACCTCCTCCATTCATGGAAAACTTTCCAACAAGAGTGAAAGAGCACTTCAGTGCCCTCTGTGTGATTCCTGTTTTCAATTTAAAACAATATGAAGTTACATTTGAAAACTAGGCAAAAATAAAAAATGGAGGTTAAAATAAGACCCGCTAAGATGTAAAAACGTGGTAGTGTATTCAGTATGTATCTACTAAAAAGTATAAAATGACAGTGGTGATTGTTTTTTTGTTGTTGTCATGTTATGTTTTGTCTTTTTAGTTTTCAAACCAGGCCGTGTGATACTCATATTTAAATGCTTAGGCATTTTCGTATGCTTTAAAATACTTTTAAATAAGTAAGTAACCAAAGACTCCCATAGCAATGAATGCCCTAAACATAAGCTTACAAGCAACTGAAAGCCTTTATTTTTACCAGTTTAGTAAGACATTCTTTGTAGATTTACAGACTTGTGTGAAATACAGTAAAATTTGTGTGTCAACTGCTATTTTTCTGAAAAAAAAAAAAGAAATCAACAGGATCTTCTAATAGCACATTGCTGTAAAACCTGGTTTTGCTGTTACTAATAACATTTCTTTTTATTTTGATATGTCTCTATCATCTAGGTTGTGCCTTATTTCTATTGTCATTTAACAGAGATGAGATAGTTCAGCGGTAAAGGTGCTCTGTGTAAAGTCTGACGACCTGAGGTCAATCCTTAGAATCCGCATGGTGCAGGGAAAGAATTAATTCATAAAATGTGGCCCATGCATATACAGTCATCCAATTAGACAAGATGGATGAAGCAAAGAAGGGCAGGCCGACAGGAGCCGGATGTAGATCTCTCCCGAGAGACACAGCCAGAATACAGCAAACACAGAGGCATATGCCAGCAGCAAACCACTGAATTGAGAATAGGACCCCCGTTGAAGGAATCAGAGAAAGAAATGGAAGAACTTGAAGGGGCTCAAGACCCCATAGGTACAACAATGCCAGGCAACCACAGCTTCCAGGGACTAAGCCACTACCTAAAGACTATACATGGACTGACCCTGGACTCTGACCTCATAGGTAGCAATAAATATCCTAGTAAGAACACCAGTGGAAGGGGAAGCCCTAGGTCCTGCTAAGACTGAACCCCCAGTGAACGTGATTGTTGGGGGGAGGGTGGCAAGGGGGGAACAAAGTAACACTAGAGATAATCTGATGGCGAGAGGCAAGCGCAGGAACCCAAGCAACAGAAACCAAGACTACATGCCATCATCGGAGCCCAATTCTCCCACCAAAACAAACATGGAATATCCAAACACACCAGAAAAGCAAGATCTAGTTTCAAAATCATATTTGATCATGATGCTGGAGGACTTCAGGAAAGACCTGAACACACTTAGGGAAGCACAGGAAAACATTAATAAACAAGTAGAAGCCTACAGAGAGGAATCGCAAAAATCCCTGAAAGAATTCCAGGAAAACACAATCAAACAGTTGAAGGAATTAAAAATGGAAATAGAAGCAATCAAGAAAGAACACATGGAAACAACCCTGGATATAGAAAACCAAAAGAAGAGACAAGGAGCTGTAGATACAAGCTTCACCAACAGAATACAAGAGATGGAAGAGAGAATCTCAGGAGCAGAAGATTCCATAGAAATCATTGACTCAACTGTCAAAGATAATGTAAAGCGGAAAAAGCTACTGGTCCAAAACATACAGGAAATCCAGGACTCAATGAGAAGATCAAACCTAAGGATAATAGGTATAGAAGAGAGTGAAGACTCCCAGCTCAAAGGACCAGTAAATATCTTCAACAAAATCATAGAAGAAAACTTCCCTAACCTAAAAAAAGAGATACCCATAGACATACAGGAAGCCTACAGAACTCCAAATAGATTGGACCAGAAAAGAAACACCTCCCGTCACATAATTGTCAAAACACCAAACGCACAAAATAAAGAAAGAATATTAAAAGCAGTAAGGGAAAAAGGTCAAGTAACATATAAAGGGAGACCTATCAGAATCACACCAGACTTCTCGCCAGAAACTATGAAGGCCAGAAGATCCTGGACTGATGTTATACAGACCCTAAGAGAACACAAATGCCAGCCCAGATTACTGTATCCAGCAAAACTCTCAATTAACATTGATGGAGAAACCAAGATATTCCATGACAAAACCAAATTTACACAATATCTTTCTACAAATCCAGCACTACAAAGGATAATAAATGGTAAAGCCCAACATAAGGAGGCAAGCTATACCCTAGAAGAAGCAAGAAACTAATCGTCTTGGCAACAAAACAAAGAGAATGAAAGCACACAAACATAACCTCACATCCAAATATGAATATAACGGGAAGCAATAATCACTATTCCTTAATATCTCTCAATATCAATGGCCTCAACTCCCCAATCAAAAGACATAGATTAACAAACTGGATACGCAACGAGGACCCTGCATTCTGCTGCCTACAGGAAACACACCTCAGAGACAAAGACAGACACTATCTCAGAGTGAAAGGCTGGAAAACAACTTTCCAAGCAAATGGTCAGAAGAAGCAAGCTGGAGTAGCCATTCTAATATCAAATAAAATCAATTTCCAACTAAAAGTCATCAAAAAAGATAAGGAAGGACACTTCATATTCATCAAAGGAAAAATCAACCAAGATGAACTCTCAATCCTAAATATCTATGCCCCAAATACAAGGGCACCTACATATGTAAAAGAAACCTTACTAAAGCTCAAAACACACATTGCACCTCACACAATAATAGTGGGAGATTTCAACACCCCACTCTCATCAATGGACAGATCATGGAAACAGAAATTAAACAGTGATGTAGACAGACTAAGAGAAGTCATGAGCCAAATGGACTTAACAGATATTTATAGAACATTCTATCCTAAAGCAAAAGGATATACCTTCTTCTCAGCTCCTCATGGTACTTTCTCCAAAATTGACCATATAATTGGTCAAAAAACGGGCCTCAACAGGTACAGAAAGATAGAAATAATCCCATGCGTGCTATCGGACCACCACGGCCTAAAACTGGTCTTCAATAACAATAAGGGAAGAATGCCCACATATACGTGGAAATTGAACAATGCTCTACTCAATGATAACCTGGTCAAGGAAGAAATAAAGAAAGAAATTAAAAACTTTTTAGAATTTAATGAAAATGAAGATACAACATACTCAAACTTATGGGACACAATGAAAGCTGTGCTAAGAGGAAAACTCATAGCGCTGAGTGCCTGCAGAAAGAAACAGGAAAGAGCATATGTCAGCAGCTTGACAGCACACCTAAAAGCTCTAGAACAAAAAGAAGCAAATACACCCAGGAGGAGTAGAAGGCAGGAAATAATCAAACTCAGAGCTGAAATCAACCAAGTAGAAACAAAAAGGACCATAGAAAGAATCAACAGAACCAAAAGTTGGTTCTTTGAGAAAATCAACAAGATAGATAAACCCTTAGCCAGACTAACGAGAGGACACAGAGAGTGTGTCCAAATTAACAAAATCAGAAATGAAAAGGGAGACATAACTACAGATTCGGAGGAAATTCAAAAAATCATCAGATCTTACTATAAAAACCTATATTCAACAAAATTTGAAAATCTTCAGGAAATGGACAATTTCCTAGACAGATACCAGGTATCGAAGTTAAATCAGGAACAGATAAACCAGTTAAACAACCCCATAACTCCTAAGGAAATAGAAGCAGTCATTAAAGGTCTCCCAACCAAAAAGAGCGCAGGTCCAGACGTGTTTAGTGCAGAATTCTATCAAACCTTCATAGAAGACCTCATACCAATATTATCCAAACTATTCCACAAAATTGAAACAGATGGAGCCCTACCGAATTCCTTCTATGAAGCCACAATTACTCTTATACCTAAACCACACAAAGACACAACAAAGAAAGAGAACTTCAGACCAATTTCCCTTATGAATATCGACGCAAAAATACTCAATAAAATTCTGGCAAACCGAATTCAAGAGCACATCAAAACAATCATCCACCATGATCAAGTAGGCTTCATCCCAGGCATGCAGGGATGGTTTAATATACGGAAAACCATCAACGTGATCCATTATATAAACAAACTGAAAGAACAGAACCACATGATCATTTCATTAGATGCTGAGAAAGCATTTGACAAAATTCAACACCCCTTCATGATAAAAGTCCTGGAAAGAATAGGAATTCAAGGCCCATACCTAAACATAGTAAAAGCCATATACAGCAAACCAGTTGCTAACATTAAACTAAATGGAGAGAAACTTGAAGCAATCCCACTAAAATCAGGGACTAGACAAGGCTGCCCACTCTCTCCCTACTTATTCAATATAGTTCTTGAAGTTCTAGCCAGAGCAATCAGACAACAAAAGGAGATCAAAGGGATACAGATCGGAAAAGAAGAGGTCAAAATATCACTATTTGCAGATGACATGATAGTATATTTAAGTGATCCCAAAAGTTCCACCAGAGAACTACTAAAGCTGATAAACAACTTCAGCAAAGTGGCTGGGTATAAAATTAACTCAAATAAATCAGTTGCCTTCCTCTATACAAAAGAGAAACAAGCCGAGAAGGAAATTAGGGAAACGACACCCTTCATAATAGACCCAAATAATATAAAGTACCTCGGTGTGACTTTAACAAAGCAAGTAAAAGATCTGTACAATAAGAACTTCAAGACACTGAGGAAAGAAATTGAAGAAGACCTCAGAAGATGGAAAGATCTCCCATGCTCATGGATTGGCAGGATTAATATAGTAAAAATGGCCATTTTACCAAAAGCAATCTAAAGATTCAATGCAATCCCCATCAAAATACCAATCCAATTCTTCAAAGAGTTAGACAGAACCATTTGCAAATTCATCTGGAATAACAAAAAACCCAGGATAGCTAAAGCTATCCTCAACAATAAAAGGACTTCAGGGGGAATCACTATCCCTGAACTCAAGCAGTATTACAGAGCAATAGTGATAAAAACTGCATGGTATTGGTACAGAGACAGACAGATAGACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCACACACCTATGGTCACTTGATTTTTGACAAAGGAGCCAAAACCATCCAATGGAAAAAAGATAGTATTTTCAGCAAATGGTGCTGGTTCAACTGGAGGGCAACATGTAGAAGAATGCAGATCGATCCATGCTTATCACCCTGTACAAAGCTTAAGTCCAAGTGGATCAAGGACCTCCACATCAAACCAGACACACTCAAACTAATAGAAGAAAAACTAGGGAAGCATCTGGAACACATGGGCACTGGAAAAAATTTCCTGAACAAAACACCAATGGCGAATGTGCATACATTCTTAAAGGTACCATTGGTTATAAAAATAAAAGATTATTGTAAAAATTATTTGTTTTGATGTCGTTAGTCTAATTCTAGGGCTTGCTTTGTATTTTTCAAGTTACCTAAGTATAATTTGTTAGCATATAATTAAAACACACAGTAGTAGCAATCACTGTTTCAAGGTAAATTAAATAATATTCTATGAAGATCAAATGAAAGACATTGAACAACTTTTATTAAGTGACTGTGTAAATCACATTTTATTTGTTACCTTAGCACAAACTCAGCAAAATGTCTTCTAATCCCTTCCCATTTATCTTGAATAAAATGGAAGATTAAATGTGAGGTGTCCCCTACTGAAAATTAAGCCAAGTCCATGAGAAACCAATTGCCCATAAACCATCAAACTTCAGAGTTGTTTTAATGACTGCAAACAGTGCCAAGCATGGCTGGCTTATTGTCCCTGGAGTCTCTGTTCACATACAATTTTAAAGTTTTATGAACTTGCTAAGAACAAATAAAATGTGGTATTCTCAACTGGAGGTACATGTTTCTATACTACACAGCCCAATATTTTTCTTTTTACAATTAACATACATTTCACATGTTATACTAGTTTATGTTTGGATTATTGGTATCTTTGCAATTGTTAGTTTTTTGTCTTTTTTACAGCATTGTTCTTAATTCTGTCCTGTTATGTATGTTTAGACATACCAACACACATGCTGACACATGTTCCTTAAGGCATTTAACTCATCAGACAGGTGTGATAGGTAGTGTTAATTGTTAACTAGACAGATGTAGAATCACCTGAGAGATAAGTCTGTGGGATATTTTCTTGATTGCATTAATTGAGGAGAGACCCACACCCAGATATTCTTTAATGTGGGAGGCACTGTTCCCTGCCTGGGATCCTGGGCTTTATAAATACACTGCAGGATAAGTAGGAGCATTCATTTCTCTTTCCTCCGGACCGGTTGTGAGGTGGCCAGCTGCTTCAAGCTCCTGTTTATAACTCAATTTCTCACCATGATGTTTGTACCTCTGAACTATAAGCCAATCTTTTCTCCTTTTAAAAGTTGCTTTTGTCAGAATACTTCATCATATCAATAGGAAAAGAAATTAAGATATTGTCTATTCTTTTCTAGTTTGAGTTATTCTTGTGTATACAAAACAACTTACATAAGCATGCATGCACATCCATGAATATACACAGCTTGCTTAGGTCTGTTCATCTCTGACACACACACACACACACACACACACACACACACACACACATCCACATTGATTAAATATTTCATTTTTTCTTGGCTTTTGTACTTCTATAGATCACCTTGACACCTTGACTTGGAACAGAAATGTGTCCTCAGCTCCAGCATCATTGCTTTGCTTGCTCAGTTTTGCATATAGTACTAGGATCAGTTTTTGTATTGCCTATACATGGATCTCAAAAATATACGAATAAATAACTCTTTAAATTGTTTGCCTAGATAAGATCTAAGGTAACTTGCTCAGGCAGGCATAAACTTCATTTGTGTATAGATCATGTTGGACTTAAGTCACGCTTTTTGGCTTTATCTTGTGGGCTGTGCTCTCAGGTAGAACACAGACATCTCTACTACTCTTCACACTTGGTTGAACTGCGACCTGCACTCTTTTCAGACACTAAGTAAGCATTTTCTGGTTCATTGCTCAGGCTCCCGGTGAACTAAATGTTATTTCAAATGGCTACAACAAAAAAAGAAGGTGGCAGAAAGCACTGGAAAGTGTTTCAAGGGTTGAACTAACTGTTCCTTTGTCGAATTTATTTCTGCATCTGCGCTTAAGCATCCTTTTTATCCTGACCCTACCTATGCAAAATGAGAATCAGGTGGATGCTGTTTGCTGGAGTGTTAATAGTTAAGTATTCTTAAACAATTTCTCACTAGATAAAACACAATAAACAGCAATACAGCAGATTCTCCCAACAAAAGTACTGGAAAACATGAATCAATACTGTTTCATGTACTAAAACCCTATAATAGAAATGGTATCATGTTTTGTTTGTTTATTTGTTGTTCTTTCACCTTGAAGATGCTTGCATTATCTGACAAAACAAAGCAGAACAAGAAACAAAAACAAACAAAAACCTCTGTCTTCATCAAATTGTCTACTGCCAAGTTTTATGACAATTTCTTAATAAATGATTGATGTGAGACAGGCTAGGCCACCAGGAGTGACAACACCTCTCAGCAATTGGTCCTGAGTTTTATATGAAAACAGACTGAGAAAGCCATAGACAGCAAGTCAGTAAGCAGTGTCCCACCATGGGTTCTTCTTTAGTTCTTGCCTTCTGGTTCCTGCCTTGAGTTCCTGCCCTAATTTAGTTCAGTGATGAAACATTTTAAAATGAAGTAAACCCCTTTTTCCCTTGGTTGCTTTTGGTGTTTGCTCATGGTATTTTATCAGAGCATTAGAAACCTGAGCTAAGACAAACGGTCTCATGATTTTTCTTTTACATGCATATGCAAATGTACATATTTCTTTCTTTCTAATATAAATATTATTTTCCCTACATGGTTTTTATACACTTATTCTAACTACCATAATGTCTTCCCGGTCAAGTTTCTTTTAGTTAAGACACAACCATAGCATTTTAAGACCTATTTTTACCTTCAGGATTGAGGATTATGCCTTTCTATCCTATTGCTGAATTCTATCATCAAAAGAAGTTTTACCAAAAGTTTAAAATTAGAATCAGCAGTAGTTTCTAATAAAAGTACTTGAACCATAAATGCATTGTCTTGGTCACTATGATTATCCATTGGCTAATTTCCAATGCATGCTTAAAGACAATAAGAAAATTTAAAATTATTGGAAAGATCATATTTGAGAACACACAACCTCCTTGTTTGGTTAAAGTCTTCTATATTAGTCTGGTATGGTTATAAGAAATATTGTAGAGTGGATAGCTTAACCAGCAGAAATTTACTTTTTCATAGTTCTGTAGTCTAAAAGTTCAAAGTCAATACTGAAATGGTTTACTTTTTCTGATGTCTCAATGCTTGCCTTGTAGATGTCCATTCCATAGTTGTGTCATCCTATGGCCTCTTTTTTAATGAATATTATTCCCTGTAGTGTCTTCCTTCTTTTATATGGGTATCATCCTCTTGAACTAGGGTTGTACCCTATGGCCTTTTTTAACCTTAGTTAGCCTCCTCAAAAAATTCTTACTTTCAGAAAACTATGGTTTCCTACATTGGATTAAAAGGCCTTTATTTCATGGGATACTTGCTCTTTGGCCTGGGAACAGGATTCATAGGACTCTTTCCAAATGTGTACTCTACCCTGGTCCTCTGTTCTGTTTGGTGTCATGTCCAGCATATTGCATACCGTGCCTTTTAACCTCATTGCTAAATACCATGATGAGGAGGAGAAAGAGGTAGGTATTTACCTAAAAGATCAGGGAAGGAAGAAATTTGGCAGAAGGGGGTTTAAACAACTATAACAATACAGCCATAACTATAAACCTAGTCAAGCTCTTCTCTCCTTGCTGATGAATCCTGATGTACCTTTTGAACTTTAGGACAGTGGTAGCAACCCCAAAATATCTGATTAAAGAAGGTAGGCTCCTGATGATGAGAAATGAGTCCTTGATCAGACTGAGACAAAGGAAAGAGGCCCAAAGTCTTCCACAACCAGCCTACAGGGCTTTCAACGTCATTTCAGCATTTCTGGATGCCCACAGTGATGCCATTCCTGTTTTAGGGTACAGAGAAGCATGGTGGTATTTCTTGAGGTTACAGTCTGGAGCTGTGACTTGACCCTTAACATGGTTCCTGGATAGAGGTGCTGTCCACATATGACTTGGGATTCAGACTGTAAGGCAGGACCTTAAGTGGTCCTAATGAATGTATTTGAGGAGTACAGTAAAGAAACCACTGAAAGAGTCACTCTATCATTAAGGAGGGTTTGTGTGGGTGTGAATGTGTGTGTGTGTGTGTGTGTGAGTGTGTGTGTGTGTGTGTGTGTGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAATATGTACTTATGAATAACATCTGTAGGAGCCCGGAGAGCAGCATGGACTCTAATATATAACCATGGTGTATATTAATGGAGTACCATGTGTCCTATATGCCAGAGAAAAGGGAAATGATTCCTGGCAGGGGATAAACTAATTTCTTAAGTTCCCAGGGAATGCTGGCTTTTATCTAACCACCAGAAATCCTTCTGTATTCAAGCCTGAGCTGGGACTAGACTGCCATTTCTGGACATGTGTATGGACAGCCTTTAGGAGTTTGGGAAATTAGAATTTCCCTTGGACTTCACAATGAGAAGTGTGGGTAGTTCTGTTCTAAGATGGTTGCCTCTTTTGATAAAAAACATACAACAGTTTCTCTATGCAAACTGACTTCTGTTCCCTTTAAATGGAGCAACCATGGAAAACCTATGTGAGGACCATGAGTGCAATCCATATCAGCCTGAAACCATAAAACACTGAGTCCAAGTCAGTGTGACCACAAGCACACGTCAGTGTGATTTAATTTCAGCTTTTGTTTGCAAAATCATTCAATCTGATACATGCAGCTAGGCAGAGCTGCAGCAGGAGTTGAGACCTTCCAAGTCCTTATTCATAAGTACACAAGACAACTGTCCTTATCCTCTAGTAAAAGTTGCAATGCATCATAGGGAGGGGATGCTGTTTTAAAAAACAAAACAAAAACAGTCACCGGAAAATCCTCCTCCTTTGGGAAAGAGTTTCTGGTATCAAGATGTATAAACTGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCTCAAGGCCCTGGGTTCGGTCCTCAGCTGCGGGGGGGGGGAAAAAGATGTATAAACTGATGATACGACCAGTTCATAACATAGTTAAGGAGTAGGTTTTTATTGTACAAATGAGAGGGAGCACAGCCAGAGGCCTCTGGACGCATCCAGAGCAGAGAGAGATAGTAGGCTACACAAGAGAGAGCAGAGAAAGGAAGAGGAGGGAGACAGAGAGGCAAGAGGGAGCAAGCAAAGGAGTGAAAGTGGCCAAGAAGGCAGGGCTCTATGGAGAGGGAGTACCTAAGGGGAGGGAAGCTGGAGGAGTTTAGGGAAGGGGAGGAGGTGAGAAGAACAAGTCATTTCTCTGTGATGTGTGATAGGTACTCTTGATACTGAGGAAGCCTGGTGGTCAGCATCACTTTGACAAAGGGGAACCAGTTTTTCAAGTCCCTGAGGAATGCTGGCTTTTGTCTAATTCCAGAACTTGGCATTTTCTTTGGATCTGACACAGAAAACAACACAACAACAACAACAAACCAACAATGAAAACCAAACAAACAAGCAAAAACCCCCAAACCAAAATCCAAAACCCAGACAATGTTTGCACTGCAAGAAAACTAGACTGAAATTCTGCCTCCCAGCCTCCTTGACACTAGCCATGTTAGTCATTCAGTAGCACTTAAAATGAGTTCACTTTCACGAGGGGTTATAGTCTCATGAGGTTCTTTAGTAACAATATACAGAAGTATTCTTGTGAAGTCACTACCTCCATATTTCTTCTGTCCACACCCCCACCCTCAGCAGGCTATGCTATCTTGCTAGATTTTTAAATTTTACCTTTCCAATGTTTTACAATGAAAATCAAACAACCACAAATGCGTGTTCTCTTATTTTCCCATTTTTAACGAAAAGATAATATTCATCTTTTTCCACGATGCTTATTTTACTCAGTCAGGGGAAAATAACAAAACTCACTACACTAGGCCAGTGGGAAAGCAAACATGAAGGGTTATATACTGTGCTCAGCATACTGCCTACTTAATAGCTCACAGGACTCCAAATATGAAAGCTAGTGTTATTGTCCTGGGGACAGTGACAGCAATATTTGTACCTAGGTGAGTGCTGACGACAAAATAAGGTCCTAACTGCAAAGCTGCCATGCCAACACCTAGAATGTAAGAGACACTGAAGGACAATTCGAACCAACTGGGGCCAGACGTTAAATATCTACCATGTGTCGGCATAGTAACAGAATAACCATGCACTCTACAGCCGTACTTTATAGTTTGGATGGTGAGTAGTGACGTACAGGAAAGCAATTATAAAGTACAGAAAAAAGATCTGTGAACAGGTTCAGAACAATCCATAACCAACTTTCAGGCACAGATATCTCTTTCTATTAGTCAGGAGAAAGTAATGTAAAAGCAAAGAATGAAGAAATTGAACACGGAAGGCATAGACGCCATGGAGACGGCGGAGCATTAGCGCAACGGGAGGTGTGATGCCTCAGATGTTTAGGGAAAGGATTTTTTGCTGATTTCCTGGAATTTATTTTCAAATTTTACCATACGCTTATTGTGTTTCCATGGTGCTCAAGACTGACCATTTTGGTATAAAATATATTTACCAAAATTAAAATTATAGGAAGAAAATCACTTTCATCAAATTTCAGTAACTATTTTATGAAAATAATAAATTATACTAGATTAAGAAAAAACAAAGATTAGACAATGAGCAAGACTATGGTGAATATGAATTCAGTTTATTTGATGTTATTAATGAGCATTGCTGACATCAACTAAATAAAGATGTATGTGCTTAATCAATTCCATGTTTTATATGAGAAGTTCGCTTCCTCTCCTAATAACATCATGAATGAAACCCGATTCTACTCCTATAGGAGTAGAAGATGAAATTTATCTACATGGCACACTTTATGGTATTTAAACATGAACCTCACCCTAAACATAGCTGTTTCCTAGCTGTCAGGGATGCAGCAGAACGGAACATGTCCATTCATATCAAGGATGCTGTTGGTGCAAAAAGCTCTATTTAACCCCAGCACACAAAGCACAATCCGTTGTCCTTCACATTCCTATGGATACCAGCATATAGAGAAGGTGGAGGTTGAACGCATGTGTAAATAGGAAAGAGAACTTGAAATTATCATTTGAGATACATAAGAATCAGCTGCAAAGCTGGTCAATAAACTGAATGTCATTAAATTTTGGCCTTGTACAAAACTGCAAATTCAAATCACTCCAAATTCCAAGCTGCAGTGTGATAACACTTCATGAAGCTTTTATAGGAACAGAACCAAGAACAGCATAAATTAAGACATTTTCCAAATATGTAACGGTAGGTAATGTCAGATGGAAAAGTTACAGCAAAGCAGAGATATCTCTGGTATAGACCTCAGAAGTTAACTAATGGCATTTTAGCCTTTGTGATGGCGTTAGCTAAGCGGTCTGTTTATATGTTGCTCAGGTTATGTTAAAGTAACATGCTCAAAGACCAAGTATACCACTTTTGGTTTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTACTCATATGCCCCAGGGAGTGGTGTAGTCAGCTAAGATAAAAAACAATACATTCAAACTTTAGCTCTCCTATCATGGAGATTCTCAGGGAGAATATTCATTCAGTATGTGCAAGAGGATGGTGCGGTAAAGGAAAGCAGCTCTGCACAAAAGTGGGAGGAGGTGTTAGGAGGAGTCTGAAAATGGCTCTCTGTGTCACCTTTTCTAGGACATGTCACTCTGACAGCCTGCTTCTTCATGCCTTGAATTAGTTTGCTATTCTATACATTGGAAAATACTGTGGGCAATGTAAATAATTCTCAATCATTGAAATACAAACCAGTTCAAAGGTGGCCTGTGACTGATTTTCCCCTGGGCATTTGCCAGTGTTCCTTCTCTACTGGCAAGAAGCCATTGGGATTCTTAATGCCCCCCTGACTTAATGAGTCAGATTTCATTTCTCAACAAGTATTCTTCTCATATACTTTCCTTTTGTTTTGCATGTGTGTTATAATATTAATATGTTTATAGTAGCACATGGTGTGTGTGTGCATGTGTGTGTGTGGTGTATACACATGTGTTCCAAGGTGAACACCTGTGTGTGGAGGCCAAAGGACTATCAGGTACCCTGCTTTATCACATTTATCCCCTTGAGACAGGGCTGCTTAATAAACCTGGAGAACAATAGCAGACTAAAAGACCCGAAGATTCTGCTCAAGCATTTATCCCTTCTTATGCAGGAAGGTCTTTTACACATTTAGCTATTTCCTTTCTCCCTGCCTCCTTTCACACTTTTATAGAGGTCTCCTTTTCTTAAATAATTTCATACATTTGCAGAATGAAATATGATTATATCTACTCTATTTTCCTCCTCTAAAGCTCTCCATTTACTCCCTGCATGCCCTTTCCAACGTGCCCCACCTCCTGCCTCCCTAGTCCCTCTCTGTTTCTCTCTCTTGCATACAGTCTACTTGTGCTGTCCATATGTGAACATCTTTGGAGCCCATCCTGTGGAGCATGGCAAACATATCAGTGGCATTTTCACTTTTGACACAGCTATCCTTGAAGAGGGAATTATCTGGGTATCTCTAACATATTCTGTTTCCTGTCATTCACATGCAATCCTTGCCATTTTAAAGGGTTGATTTGAGTTTGATATCTCTAAGAAGGCTTAAGAAACCTTTTCCTTCTCTTTTAG
Seq C2 exon
CTTCAGACAAGCTTGACTGAACCAATGACGTTATCGAAATCCATCTCTCTTCCTCGCAGTGCATACTGGCATCACATTACACGTCAGAACAGCGTTGGAGAAATCTACAGCTTGCAAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSRNOG00000038190:ENSRNOT00000058139:6
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.025
Domain overlap (PFAM):
C1:
PF0217412=IRS=PD(32.7=68.1)
A:
NA
C2:
NO
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]