RnoINT0097292 @ rn6
Intron Retention
Gene
ENSRNOG00000008356 | Myo5c
Description
myosin VC [Source:RGD Symbol;Acc:1309994]
Coordinates
chr8:82171497-82182813:+
Coord C1 exon
chr8:82171497-82171627
Coord A exon
chr8:82171628-82182702
Coord C2 exon
chr8:82182703-82182813
Length
11075 bp
Sequences
Splice sites
5' ss Seq
CAGGTAGGG
5' ss Score
9.46
3' ss Seq
CTGTCTTTTCCTGTGGTCAGTAC
3' ss Score
6.38
Exon sequences
Seq C1 exon
CGGGGGAAGGGAGCCGTGGCACTCGGGGAAACTTCTGGACAAGATGGCCAGGCTCTGACTGGTTGGGCGCGCACAGTCCCCTGCAGCAGCAGCAGAGGAGGCCCATGGCGGTGGCCGAGCTCTACGCGCAG
Seq A exon
GTAGGGGCGCGGGGACACATCTGTGCACCTGCCCGGACCTGTGGAGGAGCGGAGGCCGGGAGCAGCTGCCAGCTCCACCCGGGTCCCCTGTGGGTGGGTACACCCAACGGAAGGCTGCTATTCCATGCCCGGTGGCTAGATCACCCAGACCCTTCCTGCTGCCACTGATGGAATCTGAGTCCCGCAGTGGGCAGGAGCTTCGATCCAGCACCACAACCTTTGTAACCAGCATTGTGACCTTCCAGGCCCTCGGAGTCTGGAGGACTCCGAGGCAAGATCGGTGGTGTCTAGAATGCTGGTGAGCTTCCCTGAGCGGGTTGAAGACCCTCAGGGGAATCTGCCTGGAGCTGCCTGGTCTGAGCACATGAACCAGCAGCCCAGAGTCCCAGACCCCGGGCTCTGTTGGGCTCTTACTAGCCAATGTGCTCAGAGAGTACCTCCGACAGGCCTGACCCTGAGCACGAGCATTGTGGAAAACTTCCAGGGGTTAAGAGCTTCATTCTCATCCAGAAAAAAAAAAAAGGTGAAAATAATTGACGCTTTAAAAAGAGCCATGACACAGATCCTGCTACACTGTTGCAGGGGAAGTTAGAACCCTTTAAATTCTGACAGATGGGACTAGAATGGATTCTATTGGAACATTTACACACACACACACACACACACACACACACACACACACACACACACACACACACGAGTAGCTTAATGGGGGTTTGGGGAGGGGTATTGTTTGGTTTGGGGTTTTGTTTATTGAGATTGTGTCTCACTGTGTCACTCCAGGTAGCCTGGAAACCACTAGGGAGATGGGGCTGGCTTCAAACTTACAGAGTTTTGCCTGCCTCTGCCTCCAGAGTTCTGAGATTAAAGGTGTGGGCTCCATGCTTCACCATATTTCTTAGGACAGGTTCTTGCTTTGTGTCCCTGACTGGAGTGGCCCTCCCTACATAGCCCAGGCTGACCAGACTTGAGGAGACTTTGTCTCAGCTACTGGAGCAGTGGCATTAGAGACATCCCCCACCCCACCTATCTTTATGCCTTAAATGTAAAAGGCACTTCCACTATCAATGTATAGTAAAGGGTCCTTGTCAGGATTATCTTTCCATGGGGGTTGGGGGAAGAGTTTTGTTTAAGGAATAAATTACAGCACACATCGAAGAGGAAATCCCTCTGAGGCATTTAAACCATTGCTGATCAATTCTGCACCTTTATCCTTGTCCCAAGCTGGGGTCTGAACCAAGGGCCTGTGCTTTCTGGGCAAGCACTCTACCAGGAAGCTCAACCTTTTATCTAGAATATTTTACTAGAGACAATGTAAACAAGCAGGTGACCTGCCATGTTTCTAAGTCTTCATGTGATTATCAGAAGAAGAAAAAAAACTTTAAAAAAACCCTGCCTTGTTGGGTATTTTGGGGCATAGGTGGCTGATCATTGACCTGTTTTGAGTAACGATTTTTTCTTGAAGCAGAAATACACGGGTATACCTACCCCTATCTCTAAGAACCCTATCACTGTCTGTGACCCCAGCACTGAGGCAAGAGGCCTTGGGTTTGATGTTAGCCTGGGCTACATAGTAAGTTCCAGGCAGCTAGGGTTAAATAGCAACACTTTTCTCAAAAATAAGTTAGGACATTGTAGAAAGGGGGGTGGGGTGTTCCAGATTTCTCTGTAGAAACACTGCAAAGAAAGGTGTTTTGTTTTGTTCCGGAATTGTTTCGCCTACCAAGGTATTTTCTGGTTCTTTGATGTGAGAAATGACAACCTGATGTCTGCTGGGGCCTAGAGAGTGTGGGGGAGACAGAGCTGGAGCAGATGGGGGTGTTGAGTGGAAATGGAAGGACCGGGTGGTAGGTAAGCTGTCTCCTCAGGATCCCAGCCATTCAGGGGCCTGGATAGATCCTAGACACAGAGGGTGGGGACGCCAAAGTAGAAACTGGCCTGGAAATATGGGGACAAGGGACACGCCAAGGATGACCTGGCGTCTGTGTGATTGAGAACAGGGTGTGTATGGGCTGCATAAAAGCCATTAGGAGAAGAAAATGTTTCTGAGAGAGGTCATCAAGCACATTATTTTTTAACCAGCGTTGTGTTGAAGTAAGGAGAAGACACAAGGGAGAGTAAGTGAGTGGGGAGTGCAGAGCCTGGGGTATCTCTCAAAATGAGCTCAGTCCTCAGAGGGGAGCCCTCCACCGGCTGTGGGCACTGAAACCAAGGCAGGAGTGCCACTGCAAGAGAAAAGAGAGCCAAGGCTGGGACAGAGGAGTGTCTGCATGCCAAGGGAGCAGCAGCCAGCAGCCAGATGAGCCATCACAGAGGAGGAGCCAGAAAGGCTGGGAAGTACCAGGAAGGGAGCTTCCCAGAGGGAGAGGGGACTCCTGAGAGAGTCCATGGGGCAGGAAGTGCAAAGCAACCCACCTCTCTCCATAGCTGCCGGCCTTGGAAATGTTCCAAGCAGAATTACTCGAAATCCCTTTGAGAAAAACTGGTTTGACCAATCCCCACTTAAAAACTGTGGTCTGTCCCTCTCAAATCCCAATGCAGCCGTAAGGCCCACTTCTGCATCCTCACTGAGCCCCTGCCACTTTTAGCTGGCTCATGCCTGCTAGGCAGCCTGCCTGTTCTTCACAGCTTGGTCTGCCTGGTCACCACTGGCTTGGCACCTGCTTCGTTAAGGAGCGAGCACACCATTCAGCGTCCATCTGAGCAGCCCTCCTGCCGGCACCCACCGGCACACTGTTAACACGGTCAGCTCTCCTCGGCCGACCACTACCTGTAAAGACCAGGACACAGTGAGAGCACTCAAAATGCCTGCTCTGTGCACACATGAAGGAACGGGGGGTTCTGTTTACAGTGACAGCTGTGGACATAATCTTATTTTTTTCTTATCTTGCACGAATATTTCCATGAACCAGAAATCACCCTCAGAACCTTCTTTTGATCTGAAATAGTCTAGAAAAAAAATTATGTGTTACACCTTCACATCCCATTCTATACAGGGCTCAGATCAAGGACGTTGTCTGAGGTTACGCAGAGCTGACAGAGTCGGATCCTTAATGCCTCTCAATGCCTTGACCTGGGCCCTGTCCTTATCATCTTCAAGGAATTGAAGTTTTTTCCCACACAGAGGACTTGTGGAAAGTCCATCTGCTTCCTAGCTGTATACAGTAACTATAGAACCAAGCCCAGTGTCCAGCAAGTAACAAGGCCCCACCGTGGTGGGGCAGGGAGCCGTGCAAACCCTGCCTCAGAACTTCACAGTGCCATGGGAGAGGCCTCTGAAGACCAAGAGCCTGTACATGCCTGACCACTGCTGAGAAAGGTTGTAGGGTCAAAAGCTGCTCCAGGCCGTTCTCCAGTCAGCCCCTCTGCTGGTGATGTTGCCATCTACCAGCTGCTCAGTGGGCTGTGGGCAGAGCTGACGTAGGCTTTGCCCAGAAAGGTACAGTCTTTAAATTGTGTACCTGTCTTGCTTGAATATGAAGAGTTCGCGGGTGAGATTGGGTGCCAGGACTGTAGACACACAAGGAACTCGTTAAAAAGTTAGAGTCACCATTGTTTGATCTATGAGTAGTTCAAAAGGTCAAAAGTGAAGAAGGGTCCATCGACAGTCAGCCCTGTCCACCCTTCAGCATCCTCTACAGCTGCACACACACACAGACACCTTTATCGAAGCCGCGTCACCACTTGAACTAGGACTGTGGATTGCCAAGGACTTTGGGGTCTGCTGTCTAAAGGTATTAGAATTGCAATCTTGAGATCGACTATAAATCTTGGCTGTGGGCTCAAAGGTGCAGGCGCTGGAGCAGTTGGAGAAGTAGCTAGAACTCTCTAGAAACAGCTTGCCACATGGAAGGGACAGAGATCTCAGGGAGGGACCTACAAGGAATAAGTGAAGAGGAAGAAAACAGAGGTGTGATGTCACCTGTCTGGCTCAGGTGCCCTGAGCATAGAGATTCCAATCCAGGAAGTACAGCCAGGAGAAGGCTCCTGTCAGTACACAGTCCGTGTCAGCCTTCAGGCCACGTGCATGGTGAATGCCAGAAGACCCTCAGACAGGTGGGCCACAGCTCACTGGTGACTGTGATGCAGGAGGATGTGACATAACCTTGAGCCCCTGTTGCTTCCTCAAGGCGCTCTCTGGTCCTAGCTTTGCTTCATTCTGGGCTCCTTGGTGAGGAAGCCCAGCAAAGGCCTAGAGGCAGCCTTTTGGCTCTCAGCCCTGCGGCAAGCTTGGCTGGCCATTCCAGGATGTAGGCTTCTGTCTCATGAGTCATGTGAGAGTTGGTCACTCTGTTTGCACAGCTTGTGTGTATTTTTCTAAATGCTTCAGTTAGCTCTCGCTGTGGCTTAGAGTGTCGCCCCGTGGATAGAGGAATGTGGGGAAGGAGGACAATAGATGTCCGTGGAGCTGAGTAAACTGGAGTGTTTGCTTGGCAGGCTGGGTTTCTGACGTAGGACTTTAGATCTCAGGCAGTGTATGGGCCTGGACAGGAGGACCAGTGGGCATGGTTACCTGGGATGCTGAGGTGCGTGTAGCAAAGAAGAGGAGCGTAGTCGCGTGCCTTTTATCACTACCTGCCGCTGGATGATACTTTTAGCTGAAATGACTCCAGAGGTCGCTAGGAAAGCCCTGGACAGTCAGGCAGGTAGCTTCTCAGGGTCATCGTCAGAGCCACACGCATGTCAAAGCAGAAGTCACAGGCGCTGTCTTGGTCCTTTAAGATTCTCTCTGGTGTGCTCTTGGCTTCTCTGGGTTTGAATTCGAACATCAGTGAAATGGGAGTATTGACCAGCTCAGCGGCTGCTTAGTAGCTCCCAGAGCCCAGTGTTCCTCTGAAAGTCTGAGCCGAAGGGACCTCATCCTCCAGAGAGGCTCCCATCTGAACACCTCAACTTTCTCCTGCTTCATACAGCATCTAAAATAAGCTGTCAGCCACTCTAAACTTGACAGGAAGATCTCAGCAGATCATTACAAGACTTTTAGCTCTGAAATCTTATAATGGACGATTCTTGCTACACACAGAACATGTGTGTATCTTGGGATACACACAGAACATGGCTTAACAAATTACAGTGAGAGTGGGCACAAGCCCTCATATCAAGTCTGGATGTTTCAACCCAGTAGGAGAAAAGGGGTCCCAAGAGCAGACAAAAGTCAGAGACATCCACACTCCCACTGTTAGGGGCCACAAGAACACTGAGCTACACAACTACAGCAAATACACAGAGAACGGAGCTCAGACCCACACAGCATCCACGGTTGGCACTTCAGCCTCTGTGAGCTCCTGTGAGCCCTGCTCAGTTGATCCTGTGGACTGTGCTCTTCCGGTGTCCTCTATCCCTCTGGCTCCTGCCATCCTTCCTCCCCATCTTCGGTGGGGTTCCCCAGGTTCCACCTAGTGATAAGCAAACACTTGGATTAGCAGACCTGAGGTAGGCGATGTGTGGTTGTGATGACAAGGATGCACGTGGTGGGTGTGGGTATATCTAAGAGGTGTGTCTATGTGTTCAGGGCTCCATGCAGGTCTGGGTTGTTGCCTGATTGTCTGCTGGGCTACCTCCATTGTCATATTAATTCTCTCTCTCTCTCCCTCCCACCCCCCACGTCTCTCCTGTCTTTCCTCCCCTTTTCTCCTTTCTCTCAGCTTCTCTCCTTTCAGCTTCTCTCCTTTCTCTCAGCTTCTCTCCTTTCTCTCAGCTTCTCTCAGTTTCTCTCCTTTCTCTCAGCTTCTCTCCTTTCAGCTTCTCTCCTTTCTCTCAGCTTCTCTCCTTTCTCTCAGCTTCTCTCCTTTCTCTCAGCTTCTCTCCTTTCTCTCAGCTTCTCTCAGTTTCTCTCCTTTCTCTAAGCTTCTCTCACCTCCCCAACTCCCATTTTACATCTAACCCAGCTCCTGTCTATCAAGGATCAGATCTACTTAGGTGACTTAGTCATGATCAATGTTTAATGACTGTCTGCGAATCAAGACAATTTACGTTAGCTAACAGATAATGATCCCGTCGGCCTATCTAGTATGGATGCCCTGGACCTCTTTGTTTTTTCCTGTTCTACATTTCCTCCAACCCCCTCTTGAGACTCTCGAGCTTAAAGAACCTGAGAGAGACTGTGTGACTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGACTCTGTGTGTGTATGAGAGAGAGAGAGACCCTGTGTGTGTGTGTGTGTGTGTGACATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGAGGTCCAAAGGGTTAACTTTAGATATTGCACTTTCTTAGGGACGGTCTTACCTGCTTTTTTTTTTTCTCTTTTTCTTTTTTTCGGAGCTGGGGACCGAACCCAGGGCCTTGCGTTTGCTAGGCAAGCGCTCTACCACTGAGCTAAGTCCCCAACCCCTTACCTTGTTTTTTGAAGCAAGGTTTTTCACTTGGCCTATAATTCACCAAGTAGGCTAGGCTGGTTGGCCATGGGTCTACCTGTCTCCACCCTACCCCCACGCCAAGCTCAGGATTATGAGCGTGTCTTAGTTGCCCTTCTATTGCTATGGTGAGACACTATGACCAAGGTGACCTGTATAAGTGGAAGCATTTAACTGGGGGCTTGCTGACAGGTTTAGGGGTGAATCCAGGGCCACCATGGCAGAAGGCAGACAGGCTTGGTGCTGGAACAATAGCTGGGAGCTTTACATCCTGACCTACAAGCACCAGGCAGATAGAAAAGACCTGGAATGGGCTTTTAAAGCTTCAAAGCCTTTCTTTAGGGGTTATGGAACTGTTTAGATGGTTTGTCTGATCCTGATTTAACTTTGGTACTTGGTCTCTGTCTAGAAAATTGTCCATTTCATCCATAATTTCAGTTTTGTTGAGTATAGGATGGGAAAATATCTTTACTAATCCTATATCCAATAGAGGGCTAATATCTAATATATACAAAAACTCATGAAGTTAGACTCCAGAGAATCAAATAACCCTATTAAAAATGGGGTACAGAGCTAAACAAAGAATTCTTAACTGAGGAATATTGAATGGCTCAGAAGCACCTAAAGAAATGTTCAACATCCTTAGTCATCAGGGAAATGCAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAACTCAGGTGAGAACAGATGCTGGCGATGATGTAGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTGCAGACTGGTACAACCACTCTGGAAATCAATCTGGCAGTTCCTCAGAAAATGGGACATAGTGCTACCTGAGGACCCAGCTATACCACTCCTGGGAATATACGCAAAAGATGCCCTAACATACAACAAAGAAACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGTCCTTCAACAGAGGAATGGATACAGAAAATCTGGTACATCTACACAATAGAGTAACTCAACTATTAAAAACAATGACTTCATGAAATTCTTAGGCAAATGGATGGAACTAGAAAATATCATCCTGAGTGATATAACCCAGTCATAAAAGAACACACATGGTATGCACTCACTGATAAGTGGATATTAGCCCAAAAGTTTGGAATACCTAAGAAAAAATTCACAGAGCATATGAAGCTCAAGAAGAAGGAAGACAAAAATGTGGATGCTTCATTCCTTCTTAGAAAAGGGAACAAAATACTCACGGGAGGAAATACAGGGACAAAGAGTGGAATAAAAACTGAAGGAAAGGCCATCCAAAGACTGTCCCACCTGGGGATCTGTCCCATATGCAGCCACCAAACCCAGTCACTATTGCTGATGCTAAGAAGTGCTGACTGACAGACACCTGATATGGATGTCTCCTGAGAGGCTCTGCCAGAGCCTTACTGATACAGAGGAGGATGCTTGAAGCTAACCATTGGAATGAGCATGGGGTCCCCAATGGAGAGGTTAGAAAAAGGACTGAAAGACTATACTTTCAGGGATCATTTCTATAGTTCGTTACTAGAAAAAGGACTGAACGAAATGAAGAGTTTTGCAACTCCATAGGAAGAACAAGAATATCAACCAACCAGAACCCCCCCCCAGAGCTCCCAGGGACTAAACTACCAACCAAAGAGTACATGAAGGGACCCATGGCTCCAGCCCCATATGTAGCAGAGGATGGCCTTGTATGTCATCAATAGGAGAAGAAACCCTTGGTCCTGTGAAGGCTCGTTTTCCCAGTGTAGGAGAATGCCAGGGTGGTGAGGTGGGAGTGGGTGGCTGGGAGGGGAGCATCCTCATAGAAGCAGGGGAAGGGAGGGTAGGAGAAGTGGAAACTGGGAAAGGGAATAACATTTGAAATGTAAATACATAAAATATCCAATTTTTAAAAGTGTAAAAAAAAATTTCAAAGCCCACTCCCAGTGACACATCCTCTTCAACAAGGTCAACCTACTCCAACTGGGCCACACCTCCTAATCCTTCCCAAACTGTTCCACTAACTGGCAACTAAGCATTCAAATATACGAACCTATGAGGGTCATTCTCAAACAACTACAGAGTACAAGACACAACACCTAGCATTGTTATGTAAGGTTTTGGAATTATATGCAGGTCTTCAGGCTTACAAAGTTAGATTTGATGATGATGATGATGTGGTGGTGGTAGTGGTGGTGGTGGTGACGATGACGACGACGAGGAGGACAATGTCGTCATCAACTTGACCCAAGCCAGGTTCATATGGGAAGAGGGAACTTCAGAACTTCAGTTGAGAAAATACCTCCATTAGAATGACCACTAGGCAAGCCTGTGGTGAGCATTTTCTTGATTAAAGGCCGATGTGGGAGGGCTTAGCCCATCATGGACAGGGTTATCCTGGTAAGGTTGCCCTGGGTTCTATAAGAAAGCAGGCTGAGCAAGCCATAGACAGCAAGCCAGTAAGCAGAACTCCATGGCCTCTGCTTTGGTTCCTGCCTCCAGGTTTCTGCCCTGTTTGAGTTCCTGCCTTGGCTTCTCTTACCAATAGACTATGGTCAGGATATATAAGCCAAATAAAGCTCATCCTCCCCAGGTTGCTTTGGGCCAGTGATTTATCACAGAAATAGAGTGCAAAGCACTGTTCTGCAAGGTAAGCACTTTTCTGAGCGGCCATCGCCCAGTGCCTTGGTTCTGAGATCTTTACAGTCAACTTTCAGAAAGTCCGCCTGCCTCGGGGAAGGATGTGGCTGTCTTAGGTAGGGTTCTTATTGCTGTTCTTGGTACTGCACAGCGTCTCTGTGTGAGGGCCTCCCGTTCATGTTCCTGTTTGCCTACCTATTCCCCAGCACAGTGGGCTCTCCTGGAGGGTTGGGAACCTACACTGGTACTTTGTCAGATCTCCTTTTTAAAAATTATTATTTTTATTTATTAATTTATTATTTATATTTATTAGTATTGGAGGGTGCATGTGTGCCATAGTGCATAGGTGCAAGTCAGAAAAAAAAAAAAAAACCTTCAGAATTGATTCTCTCCTTTCACCACATGGATCCTGGAGATGGAACTCAGGTTGCCAGAGCCAGTGGCAAACACCTTTATCCCCTGAGCCATCTTGCCAGCCCTGCCAAATCTCTTCTTATAAGGCCACTGTTCCTATAATCCCATCCTGTCAGGGCTCTCACACCAGACCTCATTTACCCTCGGTGAGCTCCCAGGCCCCAAACAGTCACCACATCAGGGATCAGGACGGCCATACTGCAGGAATCCTGGAGGGACACAGTTCAGGAGCACAGTAGGATACGCTGCACAACACTGACAGGAGACCACCAGCTCCTGTTGGGAAGAGAGCTGAGTGAGCAACTGCCCAGGGCCTTCTGCAGTCCCCAAGGTGAAAATCCTTGGCCACTGCCAATGTACAGCAGTGATAATTGAGCAATAGCCAAGTGCGATGGGTGTGTGTGTGATCCTGGCTCTCGGAAGGCAGGAGGACTGCCAGTTTCAGACCAGCCTGGGAAGCAGGCTGAGACCCTGTTTCAAAATAAGAACAGTCCTGGATAATGCTTCTGTAACAACCGTGCTTCTTTAGTATTTTATGAAGTGCTTTTATTTGCTTGTTTTGTTTTAGAAACAGGGTCCTGTGTATCCCAGGCTGACTTTGAACTCGGTATATATCCATGAATGACCCTAAATTCCTGACACCATACACACACACACACACACACACACACACACACACACCTCCTGAGTGTTACAAGTGTGCACCACTATGTCTTGTTTATTCAGTCCTGGGGGTAGAACCCAAGGCTTCATTTATGCTAGACAAGCACTGTACCACCAAAGTCACATATGCAGCCTCAATTGCTTTCCAGGACCTATTCTTAGCCTCCTAGCGCCCCTGTAAAGAGGACTGTATATCATTTTACGGGTATAAAAAGAGGTACCAGAAATTAAATAAGTCGTCTATTGATAGAAGCCCAAATCCTCTGCTGAGTCTTGCAGAAAGTTCCCACTTTCTATTAGGGAACCCTCAGATTTTCTTCCCACCCCAAGCTTGCAGTTTTTCATAATCTGTTCCTGAAACTTTGAAACTCAGCTGTCTATGAAACAGGGCCAGTAAGCCTGGTGGTGCATCGCCAGCACACTAAAATTACCTCCTCACAGCACAAGAGGACGCGTTAGTATTCTGAGATGATGTGTGTGTGCCTGTGTGTGAGTGCCTGTGTGTGTGTGTGTGTGTGTTCACATACAAAGGCCAGACATCACCATGTTTGTTGAGACAGGGTCTCACTGGAATCTAGAGCTCACTGATTGGCTAGGGTGGCTGACTGGCCTACCTCAGGGATCCACCAGGGTTCTAAACACCTCGGCTGGCTTTTTACTTGGCGGCTGGGACTTGAACAAGTCCCTGTGCTTAATACAGCAATCACATTACCTACAGAATTATCCCTTAACCTTGAAAGTCTTCTTAACGTGGGCATTGATCCAGTTGACAGGATGTAATCCTGCTTCCTATGGGGATCTAATGATCTGTGTTTGGGGTTTTCAGATGTCGAGATTAAACCTGTCTTTTCCTGTGGTCAG
Seq C2 exon
TACAACAGGGTTTGGATCCCAGATCCTGAAGAAGTTTGGAAGTCTGCTGAAATTGCGAAGGACTACAGAGTGGGTGACCAAGTCCTCCGACTCTTGCTTGAGGATGGCACG
VastDB Features
Vast-tools module Information
Secondary ID
ENSRNOG00000008356:ENSRNOT00000011768:1
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion (1st CDS intron)
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.000
Domain overlap (PFAM):
C1:
NO
A:
NA
C2:
PF0273614=Myosin_N=WD(100=75.7)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Chicken
(galGal3)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]