RnoINT0103697 @ rn6
Intron Retention
Gene
ENSRNOG00000003947 | Ntn1
Description
netrin 1 [Source:RGD Symbol;Acc:619809]
Coordinates
chr10:54761871-54775896:-
Coord C1 exon
chr10:54775822-54775896
Coord A exon
chr10:54762326-54775821
Coord C2 exon
chr10:54761871-54762325
Length
13496 bp
Sequences
Splice sites
5' ss Seq
ATGGTAAGC
5' ss Score
9.26
3' ss Seq
ACCCATTTGCTTCCCTGCAGCTG
3' ss Score
10.96
Exon sequences
Seq C1 exon
ACTGTGACTCCTACTGCAAGGCTTCCAAAGGAAAACTGAAGATGAACATGAAGAAATACTGCAGGAAGGACTATG
Seq A exon
GTAAGCGGGGGAGACTCCTCAGGGGTGACTTGCAAGTGACTCGTGTCACCGAGTTCCTGGGATCCATGAAATCTCTTTTCTGAGAGAATACCAGTCCCTCTGTGTCAGAGAAGCCACAGGAGCCTGGATTCTCCCAACTGCCCTGCAAAGGGCATCTGGATCAGTGGGGGCCATCGAGGCTGGGATTTCTATCCTGGACTCTGTTAGCTCTGCCCAAAGGGCTATGTGGCTGCACAGCACTTGTTTGCCCTCTGGTCTTCTGTGCCCTTGTCTCTCACTCAGTGAGGTTCTTCAGCATTGCAGTGGGTGGGAGCTGTAGGGTGCTTAGAGATGCCCATGGGCCAAGGGGAGATGAGGAGTCTGCACCGTAAGACTGTCCATCCTATTCTGACCTTGAGGACCCTGAGCGGTTCCTGGGGACTTTCAAGGGGAACACATACATGGGAGGCCACACTAGGCAAGCTGCTTGAGCCAGACTTGAAGTTCTCCCCTTAGGTTCATAGCCAGGGCTTCTCCGCATATAAAAATGAATCATTAGGCTCAAAGAGATTTTGAGAACCTCTGAAACATCATTTTACTGTGAGCATGGGCACACACACACACACACACACACACACACACACACACACACACACACACGCATGCACGCACACATGCACGCGTACCCCTTACACTGAAGCCAGAGAAGACTCTCAGCATCCAGACAGCCCCACTTGTCACAGGCCACGTGGCTTCCTCAGAACCAAAGACAGCAACAGGCAGGTGTTAGATAGCAATTCACAAGTTGCCAGGCTATGGGCATCCAGGTTCAGGCCCCACCTTCTACTAGGGGTCCATGGTCAACTTCCCAAAGAAAGGGCCCCTTAAGGAATGATACCCCAGAGCAATGCAGAAGCTTGCAGCTCCCACTGAGGAACAAACCTGGGTTTCCACAACAAGCTTGTTGTCCTTGAGAAATAAAGGAAAGACTTGCCTCTTTCAAGCTGGGATAGTGGGTACAAGGGAGACCTCTCAGGTCTCGCCCCCACCTCTGCCAGAGACTAATGAAGGCAGGCCCAAAAAATGGCCTCTCCAAACCTCTATTGATTGAGAACTTGGGGCTCCTGTACTTTCCCAGCATTGGCCTTGAAACCTAATGAATGCTCTTGTTAAAGCAAAAGGCACAGTGCAGTGAATGTGACCGCTACCACCCCTCCCATCCCATCCTTAGCACCGGCAGGAATGGGAGTGGACAGGCCTGCCTGAGGAAGAGTGGGTTGGGGTGGGTAGCCTGCTTGAAGAAGAGTAGGTTGGGGTGGGCTGGGATTGAGTTATCTCTGAAAAGTGCTGGTCCACGGTGTCAATCTGTTCCTTGGATTCAAGGGGAGAAATCGTAACATTACTCAAATGGATCCCATGGTCCTGCCACCTGACTTAGCCTGGTTTTGTTCTCTCCCATCTATTATTCCAGAGCTACCCTGCCCTTTCCTTTATGGACTCAAGACTTGGGTTCTCTGACCCTGAATCCTGGGTGTTCCTATACTCAGCAGGAGAGGTCGGGCATCTTTCTTGGATGGGGAAGGGTTGGGTATGGTCTCTGGGGTCCATGCTGGCTTCTCTCTTTTTTTTTTTTTTTTGGTTCTTTTTTTCGGAGCTGGGGACCGAACCCAGGGCCTTGCGCTTCCTAGGCAAGTGCTCTACCACTGAGCTAAATCCCCAGCCCCCATGCTGGCTTCTCTTTTCTGGTACATCTATCTTCTCAGGTCTGACAAGGCCTGGGTCTACAGTGTCCCCCATCCCCAGCTGTCACTACCTGGCTCTGTTTTTTGTTGTTGTTGTTGTTTTGTTTTGTTTTGTTTTCCTCCTTCTGCAGCAGCCCTGGAAGTTTCCCCAAATTAGTCCATTTTCTGTTTCTCTAACAAAATATCTGAGCTCATGTTGGCTCATGGTTTCTGAAGTCCAAGAGTGTTTAGGCCCACTCAGCTTCTAGTGAGGGCCTTGTGCTGTGCCAACCCATGGTACCGTGTGACGTAGAAGAGGAGACACGGGGAGCCAGGTGCATGCTCGTAAGCTCCTAACTACCTTTCATGGGGTTGCTCCTCCTGACCCAGCACACCCCTAGAGGGCCCTACCCCTTCTTAGCCCTGCTCTGCTGGGGACCTTCACACAGGTTCTGGTAGAGACATACCATGTTCTAAGCACTGCAGGGCTTTCTGGTTTCAGGGCTTCCCCGGTTCAGTAAGGTCATATTGAAGCTCACGTAGTTCAGTCTACCGTGCTGCAAGGCGGGGTCACATGAGTTCCACAGAGGGCTCAGAGGAGCTAGGTACCATGGGATGTGTTGAGCCTTGGAGCCTGGTTTGGGAAGGTGGAAAGTGGCCTAGGCAGGGTGGTGGCACCTACAGGTTCGTGAGTGCTGCAGAGGGTTACAGTATTAGCCTTGCTCTGAGCCTGAGGCTTCTCCTTGGGCTTGGCTGGGCTGTGGAACTCTTTGATGTATCCTTGGTTGGACAGACACAGCCTAGGTGAAGTGTGGCTAGGTGGCTCTCCCATGCTCAGAAGACCCGGCCAGCCCAGAGGAAGATGGGCTGAAGGATGACAGGAGAGAACCTGCCTAGATACAGAGGAGGTGAGGCTAGGCCAAGCGGAGGAAGGGAGCTGGCTCAGAGATGGTCTAATCCCTGCTTGTTTGCTGACTGACACTCCGGCAGGGGGCCAATTAGGAAACACATTTCCTTCACATCCCAGGCACTTGGATGTTCCAGAAGTTGCTAATTAGAACCTAGGTTTTGCCACCCCTGCTGAGAGAGGAGCCCCTTCCTCTTCTAGCACAGAGATAGGCCTGACCTGGAGCAGCTAGTGAACTCTCTTTCAGGCTCCACTGACCCTGAGTGGTAGCCAGTAGGCAGAAACCAAGAGGCCTATGGGAAGAGACTGGCTGGCCAGCCCAATGTGTGTCAGCCCTGAACCCAGACCAAGCTTGGGTGGTGGGTGGATTTTAGGTAAGGCAAGGAAGAATAGAGATCAGGGAGAGCCTTATGCCAGGACCTTGCTGGGCTGCTGGCCCCCATATAGAGAGGACCCTACCCATCCAGTGGGGAAGAAGTGCAATCCTTTCCCATGTGTAAGCTTCACCAGTCTGGGCTTCCATTTCTTCACGTTTCAGATCAAGGAGATATAATATCCAAGTGCTAGGCACCATGTCTAAAGAGGCTATAAGTACCCCATGGAGGTCAGGTCATCCATCACCTAACCACCCCTCTGCTGAGCCACCTCTGTTCTCTGTTGCCCTCTAGGGGAATCCAGCTTACCTCACAAATGTTCCAAAATGTCAAAGCCCAGCCCAGTGTGGAACCCCTGCTTTATTCTTTGCAAGAGTTCTCAGAACACCTCACTCTGAAGAAACCCTTCTTTTGGGGGACAAGATGGGGGATATGTACACATGCTCCCCCTCACAACATGATTGCACCCCTGTCAGCCCAGACATAGGTGGCTAAGTCTGAGGCTACCGCCTGCCCTGAGCTTCCTTCACTTGGTGTCCCATAGCTCCAAAGACTTCTGCTCCTGAGGTCAAGTGCTCTGGCCTGGCACAGTAACGGGGGTGTCGTTGGCTGTGGCCATCTATTTCCTGGGTGTCTCCTTTCCCTTGTTTCTCTGCTTTTTGGGGAAAAGTTTCCTCTGTCTCATCTCATATCTTTAACTTTGTATTGTACAGTGCCACACACACACACACGATTGCATTGAGCTGTGGTTCATAGATCCCACCCATGTACAACACACATGTGCGTGCACACACATGTACAGGTGCACATGCATGTGGTAGTTCTGCCATAGGAACCTGGGGAGTCCTGGTACTTTATCCCATTCTCACCCTTGAGATTTTCCCTCTACATGCATTCACTAAAAGCCCTAGGCCCTGTCCTGGGTGCTGCACTCACAGATCTGCATGACACCGGAGGTTGGCCCTCAGGGGGTACACATTTGGAAGAGACACAATGAGAGCCGCAGAAGACGCCTGAGTGGGGTTGCCCGGGGCCCGGTAGCCTGTACCCACAAAGCAGGGTTCTCTAGTAATGGGAAAAGTCTCCATGCCCAGAAGCTGGAAACTGACTGGTAGGGCCTGAGAACAAGGAGGGCAAAGGCGCTGGATGCCGGGGGTGGGGGGTGGGGGGTGGGGGGTGGGTAGGGTTGGACACCACTCCTGGGCTGCTTACATTTACATGCAGGAAATATCATGACCCTACTATTGAGCGTGGTGCCTGTGCCCCTAGCAGCTGCCCAGAGAGCCTTAAGTGTCCTCTTCCTTCTCCCTAGGATGCGCATGAGCCCTTGTTGTGAAAGGTGAGATCATCTCTCACTAATTCTTGGAAAAATGCTTCATTCCCAGAAATGTTTATTAGTCCACCCCCTGTAGAAAGACATCTTGGCACTACTGGATGGAAAACTGAAGATGCTTTCACATGAGCCTCAAGTGTTCTACCTGACAGCCCTGCCAGTGATTTCCAAGGACTCGGCTTGAGGGGAAGTGCTGTAGACATCCTGGCCCTGTGTGGTGTCCATGCCAGTGTGCTGTGGCCCAGGCGGCTGAGCAGTGAAGGGCTCCTGGGCTGCTTACATTTACATGCAGGAAATATCATGACCCTACTATTGAGCGTGGTGCCTGTGCCCCTAGCAGCTGCCCAGAGAGCCTTAAGTGTCCTCTTCCTTCTCCCTAGGATGCGCATGAGCCCTTGTTGTGAAAGGTGAGATCATCTCTCACTAATTCTTGGAAAAATGCTTCATTCCCAGAAATGTTTATTAGTCCACCCCCTGTAGAAAGACATCTTGGCACTACTGGATGGAAAACTGAAGATGCTTTCACATGAGCCTCAAGTGTTCTACCTGACAGCCCTGCCAGTGATTTCCAAGGACTCGGCTTGAGGGGAAGTGCTGTAGACATCCTGGCCCTGTGTGGTGTCCATGCCAGTGTGCTGTGGCCCAGGCGGCTGAGCAGTGAAGGGCTCTGATAGATCTCGGCATGCCTTTGTGCCTAGGAACCTCCAGAGTCAGTGGCAATGCTGGGTGACCATAGCTGAGCCAGGACTGGGCTTCTCGGTGGCCCTTGTGAATATCTAGTGGCCCTGCTTTATCCTCAGCTGTGTGGGAGGGAGGGAGGTGGCGTTCTTTCTTATTCCTGTGGCTCACCGAGACCCGACAAGGTAAAACAACAAGCTGGGTATCAATGCTGTGGGATCCCAGGCCTGAGCTTCCTCCTTCCCCATGTCACTGATTTAGCATTTGACAGCCTGGAGTAGACATAGCAGCCCTCAGATGGCTCACAAATCCATACTGTAGGGGAACACTGGCTCTGGGCTTCAGATCAGACTTGGAAGAAAAGCCACACAAACATGCTGATGGGTAAGGAAGGAGGCATGGTTCCCCCAGGGGGGAGCCCCTGAGCTGGCAGGCAGAGGGGATGGCATAGTGAGTGATGGCCGTGGTGGTGGTAGAGATGGAGGAGGGCTGTGAGGAGGTGGACTTGTGGTGGTGAGCAGGGAGAGAGGCAGATGTGGAAGGGGGTGGATTACAGGGTGATGGAACCGAGCGGATAGTTGGCCATGGTAGCACTACTGTCACGGTGGAAGTTCTGCTTCGAGCGGCAGACAGAGCCCAGCCTAGCCCTTGTCTCAGACTGGGAAGAAAGGAGTCTCATAGCTGTGGGCCTGGAGCTTTGCCACCTTGTGAGCATTCTCTCTCCTCCTCCTCCTCAGTGGCCCTGGGATCGATGGTGACTGTCAGCAACCTCACTCTCTTCAGAGAGCCAGGTATCTTAGCAGCCAAGTCATAGAAGTGAACTTACCATATCTACTCCAGTGACCCTGGGTATGGACGCTGGTATTAGACTGATGTCAGGCTGCTGCCTTTTCAAGGCAAGGTTCTGATGTGAGCCGCAGGCTGCCGGTAGTAATTTCTGGGAAGAGCCATGTCACCCGGACATCCTCTGGTTGAGAGGATGGGGCACAGACAAGGCAGCAGCGTGCAGCACGGTGCTTCAGAGGCTTGCTGATCCTCCCTAGGGTCACTGGCCCCCTGAGGATCCACCCGTTTCTCCAGCCAGATGTGACCCCCCCCCCTTACTGAAGAGTGCCAACTACATATGGATGCCAGATGTGGAACTGGATCTACATGAGTCAGTCTGAGGTCGTGGAATGCGGGTGACCACCAGGTTGGGCAGGAAAGGCCAGGCAGCCCCAGTGACAGCTGGACAGCAAAGATTCTGTGCCCACAAGAAAGTGGCTCCCCTGGGGAGCCAGGTGGGGGGCTGGTAGGAGCAGCCCTCCCCAGCCTTGAGCCTGGCCTCCTGCCACTATTGCTCCAGCCAGCCCAGGAAGGAGAGATGGCTGTCCTCAGTCTGGGCAGCGCCAGGCTCTCATCTGCCTGTGTTCTGGTCTGCCATGTTCCTTTTTGCTCCCCATAGTTTCCTGTGTTTTTTAGGAAGCAGTGGTGGCTCAGTGGCTCAGAGAAACCACAGAGATTATCCAGTAAAGGATGTCTTTCTCCATTTTACAGAAGCTCAGGGAAGATGGTCTAGCCAGTGTCTAGTGATGCAGGGCAGAGTTGGGGTACACATCCCCAGGGACTGTAGTCTCTGTTGCAGAGGACCCCAGCATGCCAGGCTTTGATCCTGGGCTTCCTATCCAGCAGTCTCTGTAGACACACCAGTTCCTCCCTCCAGAGACATGGCCTGAGGTAACCGTATGTCCCAAGCTATCACACTTGAACTGCTTAATCCAGGGAGACCAGCTGCCAGGCATGGCAGCGCCCAGCCCTCCACAGGGGTCAGTATATAGCACCTATGTGGTTCCTGAAGTAGAGTTCAGATGATTTGTGTCTCCTGGGAGAAGCAAGTTTGGAGGGGGTTGGACTTCAAGGAACTTGTGGGATTTCAGAGCCAGGCCTGTTATGGATAGGGCACATTGGTTCTGCTCCAGCATGGGACAGAACTCCAGATGTAGGTATCTTGGGGAAGCTTGGTAGTGCCATTCCAGCCAAGGCATCTGGGAGGAAGGAGCTGTTCTTTGCTCCAGTTTCCTGGAGTTGGAGCCTCATGGGGGAAATGGAGGTTAGCAACACTAGACTTTCTTTGAATCCTGGAGGGGGGTAGGGGTGCTGGGACTTGGGCCTAAGTCACACAGAGGAGGTTGTTTGTTACCTCCTCTTCTTCAGAGGCCAGAACTCCGTCTCTGCCAAGACCCTGGCCTGGGGCTCACTCATCATCTACTTCCCTATGGGCAGGTTCTGAATCAATACCCAGAAGGCTTTGCTCTTCCCAGTGTCTAATTTGGATATAGTTGTATAGGTTGGGGGTCTAGCCAGTATGGGAAGCAGGTATGGATGGCTGGAGCAGCTCATGAGATCGTGCAAGGTGTTCGGAGGTAGGGTGTCCTTTTAGCAGCTCAGTTTATCTCGAGAGGTAAGCAGAGGAGCAAGGCCTGGCAGGGGCACTGCACAACAGAGGCCAGTCCTCCAGATTAGGCCACCACAGCCTAACACTTGTGGATCTGAGTGACGTGGGTGTTATGGTTTGCATAGGAAATGCCTCCCAAAGGTTGGGAACTTGGCAGGTGAGAGACCTGGTTGAAGAGAGTGGGTCTTGGGACTGTGTCCATGCAAACTTCACCTTGTCCCCAGTCCCTTGCTTGCTTTCTGCTTCCTGGCTGTCAGGAACTAAGCAATCCTGTTCAGCATATTCTCGCCACCATGCTTGGCTTTACCATCGGGACTTAAGCAGTTGAGCTCACTGGGAACATATCATACCACCTCTGAATCTGTGGCCCAGATAGAGTGTCTCTTTTATGTTGACTGCTCATTTTGTCACAGTGAAGCAAAGGTTGTTGACACACTGGGTTGAACCAGTGTGGCTGCCTATTGCTCAGGGCCAGGACTAATACCTTCTTCCAAGATGGTTCTCTGATGTCCCTTAACTCCAGGAGATGGTTTCTCCTCTCTCAAGATTAGAGTAGCTGGAGGCAGCAGCCAGGATTTCAAGGTTGTGCTGCTGGCTGCTAGGTCTGTCATGGTAGACAGGACTGATATACATATAGGTCTTACCATGTGTGCCCACCCCAGGTCTGTACTCTGACGGGTGCCACACTTTCCATATAGAAGCCCTGGGAGCAGGGCCTGACCTGGGCTGGCCTGGAAGTGCACAGTCAAGGCTACATTTCATGAAAGCAGCTGAGGATCATGACACACTCTTTCCACCTGGAGATTTACAGGGCTTTTGAGTTTAATGGTTTCTGTGGGATTCGTGTCCTCCCCCATCTTTCCTGGCTGCTGTCTCTAAGGCAAATGGGTGACAAACCTTCCTTTGCTGGTCTGGCCCAACAGGAAAGTATAGATGGGTAGGGAGGGGAGGGGGAAGAGAGGGGCAGCGGCCCTTAGGAGGGGCAGCTGTGGGTGGCCCCCAGGGCCCACTTTGAGCAACCTATAAATCCTGGAAGGCTCTAGAAGGGCAAGAAGCTTCCCCCACAGAAGCGCTAGAGAGAGGGGAGTGGCCATGGGGAAAAGCTGTTGCCCACCCAGTCTCTGCTCTCTCATGGCTAGCCCAGCAGGTGGCTTCTGCCCTACTGCACCTTCCTCTATGGCTGTGGGCTCTCAGCAAGCCATGAGTTAGCCGGCAGGGCATCTGCCTTGCTTTCATAGGTCAGGCAGCTTCCCCAGAACCCAGCCTCACTTAGATCTCAGGGGCAGGCCCTTTAAACCTTCGTGCAGGGCTATCTACTCCTGTTCCTACCTGCTGATGCCAGGTTCTTAGAAGGCATAGAGCTCCCTGTAGCCCTTGATGGCCCCTGGTCCAGAGCTGGAGTAGGGCTGTAAGGGAGGTGGGTTTTGAGGGAACTGGCTCTGGGCAGAAACAGCAATTTCCCCTGTGGAGGCATTAAGCACAGGATAATGGCCAGGGGCTCCCCTTGCTGCAGGTTGCCTTTAATGGCCTAAGAATTCCCCTGGCACTGGACTTAAGGGAGAGGTTGAGACCACTGGGAAGGGTGGCCACTCCCTTACTTCCTTGGTAAGGCGAACCTGGAGCTGCAGCTAGGGATATGTGTAGGCAGCAGATTGAATTCTGCACTCTGCGACTGAGAGAGACTGGCTGCCCTTGTGCTGCCTCAAGACACTCCTCCACACTTGGCCTTCCACTTCGCCCCTACACCAGGAGCAGCATAGGTGGCCCTTGTTAAATCTGAGTCTTGTGGGGTTGGCCCTCAGAGTCCTCACCTCCCTCTTCCCCCTAGAGACACAGCTGGGCTCTGCCACTGGTCTCAGTGGGCAGGGCACACAAGCTCGCTGGAGATGCTAGAGAATTCAGGTAGGGATGATAGGCTTTGTGGTTTACCCTGCTCTGGTAGCTGAGAAACGTCCTTAGCATTGTGAACTGGAAAATTGCTGAAGGGAGCTGACCACGCCCCGTGCAGTTACAAGGTGCTGAGTTCTGGGCTGCTCTTAGAAGCCCAAGTTTCCTGCCCAAGTTTCAAGCTCTCCCCCCCCCCCCCATTAGATTTTTCCCTAAGGATCTGTTCCATCCCATAGCTGGTTCCTCCCCAAAGAGCTCAGCTGGGGTTGCAGACAGCCTGGAAGAGCTCTTCCCAGCCCTGATTTTGTCTGCCACCAAGCGTTTTGAAGGCACAGAAGGTAGGAACAAAGATGCTGGCTCACCTCACCTGTTACCATTGAGCAGGAGACAAGGGAGGGAAGGAGGGAGGGAGGATAGGTATGTGGTGTGGAGCCAGTGTCTGTCTCGCTCATGGGCTCTTGTCTTTGCCCCCAGCACTGGCCCACTCTCAGAACTGAGGACTTCCATTCCACCAGCAACCTGTAATTTCAGGCCTCCCAGCATGCTCCCTGTGCCCATGACCACCTTGCTGGGAACCATCTCATCACCCTCCTTTCTGAATGGGAGAAACCTCACCTGAACCCCAACAGAGGATAACATCAAGACATAAGCCTAAAGATGGGGGGTTAGCACTCAGGCGGGTAGGTGGGCGGGTTTCGCTGCAAAGCTATTTGTCCTGCTCTAGCAAAGTGCAGTTGACTGTAGAGAAGTCTTCGGATTGCAGTCTAGGTGGCGAAGAAGTCTAAGATCAAGGTACCACCCCTTCTCTCCTTCTAAAATGCCACCTTGTTGCTGTGACACCACATGATGGGGGCGGCAGGGGCTCACTGAAGCCTCTTAGAGGACCACTGCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGCCCACATACTGCTGAGTTCACTTTTTAAGGGCTCCCAACTCCTAAATACTGCCATTCGGGCGGGACACCCACACGAAGCAGGGTGTAAGAGTTCTGTGTGGCCCTAAGACTGGCAGAGCTGTTGCTCCACTTCCCTCAGTCGCCTGGCCAAGTGATGTCATGTATCACCAAGTGCTATCTAGGTGTAGTCTGGAGACCTTGGTCCTTCCTCATCAGAAGCAGCAGCCAGTTAGAGGTGACAGCAGCCCTGGTGTGTGCCACGAGGCTGCCAAAGTGTGCTCTCCCTAAGTGCACAGAGCAGGTCTGTTTGAGGTCACGTCTTCGATGTGTATTTTGAATCTTTTTAGTGGTGTGTGCACTGCGGGGACTTGGCCCATGCACTGTGTGTGCAGCTCATACGTGGTGGGCTTTGTAATGTGCGGAGACGTTGCCAAGGGCAGCGGAAATGTGGATTTTTTTTTTCCCAGCATAATCATATGAATCCCGATGTCACCCTCCCTGCTTCTGGGCCTGCTGTCTCAGCCTGTAGTTAGGAAGGTCCCTACCACAGAATTAGTTAGATCTTTTGGGGACAGAAGGAACACAAATGCTTTCTTTAACTTCTTAATTCTTGAACATAGCAGCGTCCTGTGGGGACCTTCAGGGCTCAGGTGAAGCAGGCCTCTTGAGGCCTGTGGTAGTTTCTAGGGAGTAGAGCCTGCCTCCACAGAATAACTCACTGAGAGGTCTGAGGTAAGCCAGTGATGCTTATCTTCAGAGCCACAGTTGCAGGACCATGAGAGGGAAAGTCTCCAGGGGAATCTTGGGGCACAGCCCAAGGCTAGACCATGTCCAGCCAGCTCTTCTCCTGAGTTCTTTTCTGTAAAGCTGAGACCCTCTCAAGCCTGTCCATCAGGCTGAGGGCCAAGACCTCTCTAGTTATACTGGAATGGGGCCCACACTCATGACCTCACCATAATTGCCTCTGGAAAGGCCCTGTCTCCAGATTGTTATTCTCTGAGTACAGGGATGTTAGGGCTCCAACAAGGGAGCTTGGGGCATCAATGCTCCGAGTCGGGATTAGACTACATCATCAAGGGCCCAGCCAGAGGGGCCTCCACGCAGCCAGCCCATTCCTCGTCAGGCAACACTGACTGGCCAAGGATTGCCACACAGGGAAACTGCTGTGTCCTGAGAGGTTCATTCTGTATTCAGCTCAGTCCCCGGGAAAGGAAACCACAGCTCTCCTGATCACTTAGCTGAGGGGGCACTCAGTTGCCACGGTGACCTCTGTCTGCAGAGTCACTTCTCTAGGCTGGAGGGTTTCCCCACCCCCCATCCTCAGAGTTCACACTGAGTGTTGAATCCCTTGGTGACAAAAACATGGAAACGGTTGCCATGGCAACCATTCTTTGGAGCCCTCAGACTGAAGTGCAAAGTTCAGGATACCCAGGAACAGCTGAAATGAAAATATGGGAAAATCCACCACTTCTCTCACCCAGGAGGGCAGGTTGGAGCATCCAGTGCTGCTCTGCCCCCAGCTGTCCACTCTCCAATCTTGGCCAGCCAATGTGGGCACAGGAAGGGAGCAGGGAGGCCCCCTCCAGAGACCCAGGCCAGCTTTCTGATTGTGGAAGAACCAGGGAAATTATAAGCTGGGCTTCCCCTGGGGTCTCCAAGTCACTGCTGCTCTTTGTCAGGGGGTGCTCAGCATAGTCCAGGGGTAGTGCTTCTCTGCCCTGTGGGGATGAAGTGTACACTCTGTGACATATGACATACTGGGTCAGCACAGGAAATCAGCCCTGGCTGCGGGGATGGAAACGATGTCTGCTTCCCTCAAATGGGGCTGAGCGTAGCTGAGGGCTTCCCTAGGAACCTTCTGGACTTTAGAGGGTGTGTGTTCCTTTCTCCCCGGCAATTCCTAAGTAAGCTCCAAGAGGCTCCTACAGCCACTAATGTTCAGGAAGCCAATGCATACACACTACTTACCACTTACAGCCTCTCAAAAGCCCCGCACCAAGGAAATTCTTGACGGGAACCTGGTGCTCCATACACTTATTTGAACAAAGTTCCTCCATCTTTTTTTGTTGTTTATGTGTACACAAGTGGGGTGTTTGTATGTGCATGTGTGTAGGTCAGAAGTTGAGTTTGGGTATGTTCCTGTTGTTCTCTACCTTGTTTGGGGATAGTCTCTCATTGAATCTGGAACATGCCAGTCCCCAAGGATCTGCCTGTCATCCCCAATGCTGTAGTTATACGTGCTGCTTTGTCCGTGAGTTCTGAACTCATGTCCCCAGTGTTTGCCTGGCAAATACTTTGCTGACCCAGCCTCTCCCTCATGAACATGCCCTTCTACTTTAAAGTGCCTTCCATGGGAGCGTCTTCTCACATATCTGCTGTTTATCCTCAGTGTCTCTCAGACCAGCAGCATCGGCACTCCTGGGGGAGCATGTGCAGTGGGGACTCTGGGCTTCACCTGGTTCTGTTGAGTCAGAAGCTCAAGGGTGGAGTCAGCAATAATTGCAGAAGCTCTCCAGGGGTGTCTGGCACAGTCTGGTTTGAGAACCCCTATAGCAGAAGACTAGGGGCAGGAGATGGAGGGATGGAGGGAGAGATAGGGCTGAACCCGAGAGGCTCCAAGGGAGGTAGCAGCCTGGTGGGGAGTGTTTGAGGACCCTGGCCCACCCTGGAAAAGGACTGGCCAACTGGCAGGCTCTTTTGATACTGCTGTACTGAGATTCCCTGATGGGCTGTTTCAGTTTGGTTGAAGTCAGGATGATTTGGGGGGCAGTGGGGGTACATCCTAAGGCTTTGTGTGAAGTGACTGGAGCCTTTGGAAGTATAGACATATGAGGTGCTCCTTGTTTCCAGAGTGGTCAGCACTGCTGTCATCAAGGCCACTAAAGTCTAAAGGTAGACTTTACCCAGAGAGCTAAGGGCACGCTTAATCTGTCTAACATACTTGCCTGGAGTCTCTATAAGAGATCTCAAATCTCTTCCAAGAGGCAGTGTTAGGGGGCACCTTCAACAAAGGCAGGAGCAACATTTCTTGGAATAGGGGTCTTGGCCCAGGTATTAGCTCAGATTCTGGGATCAGATTTACTACAGCTCACCTATTGCCCATGGGAAGCCTTTCCAGATCCCATTCCAGGTTCTTGTAAGACACGGTGCAAGTAGGGCCCATCCCATCACAGGACCTGGGCACCTGGCTGCACTTGCCAACTGTGGCCCACAACACCCATTTGCTTCCCTGCAG
Seq C2 exon
CTGTCCAGATCCACATTCTGAAGGCGGACAAAGCAGGGGACTGGTGGAAGTTCACAGTGAACATCATCTCCGTGTACAAGCAGGGCACAAGTCGTATACGCCGTGGTGACCAGAGTTTGTGGATCCGTTCGCGAGACATCGCTTGCAAGTGTCCCAAAATCAAGCCCCTCAAGAAGTACCTGCTGCTGGGCAATGCTGAGGACTCGCCTGACCAGAGTGGCATCGTGGCAGACAAGAGCAGCCTGGTGATCCAGTGGCGGGACACATGGGCACGACGGCTGCGCAAGTTCCAGCAGCGGGAGAAGAAGGGCAAGTGCAAGAAGGCCTAGCGTGGAGGTGGCGCAGGCTCCAGGAGGGCGGGCAGGGCGCTGGCAGGGGCTGGCAGCCTTGGACTTGGCCCGCCAGGGAAGGATGAGTGAGAGTAGAGGGAGAAGGTGAAGGTGGCAGATGGCGAA
VastDB Features
Vast-tools module Information
Secondary ID
ENSRNOG00000003947:ENSRNOT00000005255:5
Average complexity
IR
Mappability confidence:
NA
Protein Impact
Alternative protein isoforms
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.037
Domain overlap (PFAM):
C1:
PF0175916=NTR=PU(7.5=30.8)
A:
NA
C2:
PF0175916=NTR=PD(91.6=89.1)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]