RnoINT0117011 @ rn6
Intron Retention
Gene
ENSRNOG00000008674 | Prdm11
Description
PR/SET domain 11 [Source:RGD Symbol;Acc:1597330]
Coordinates
chr3:81877743-81890776:-
Coord C1 exon
chr3:81890709-81890776
Coord A exon
chr3:81877931-81890708
Coord C2 exon
chr3:81877743-81877930
Length
12778 bp
Sequences
Splice sites
5' ss Seq
GAGGTGAGT
5' ss Score
10.03
3' ss Seq
ACCTGTCCCCTCCCCACCAGGTA
3' ss Score
10.66
Exon sequences
Seq C1 exon
ATTGTGGACAAGAACAACCGCTACAAGTCCATAGATGGGTCAGATGAGACCAAGGCCAACTGGATGAG
Seq A exon
GTGAGTCCCATCCTCCCAGCTCCAGTGAGCCTCACCAGCCTCTGGGATGGGTCCAGGGAGTATCTTGGGCCTCCAGGATCTCAGAGCTCTCCAGGCTGCTCCAGAACTGCAGCTGACAGGGTCTGAAAGAAGTCTCCTGTTCCCCAGGCTTCCATCAGAGGCTCTAGAGAGCCTGTGGCCAGACCAGCAGGCTGCAGGAATCAGGCTGCATGCCATAGCTCCTGATAGAACTCCTGCAAAGAGGAAAATGTGCCTGACCTAGGATGGACCCCTGACATTTATCCCAGAGCAGATTCTCGCTACCTGGATGACATCATTCCAGGGAAGACCCAGAAATCGTCCTATGGTTTTATGGTAGGGAAAGCTCCTGACATCTCCAGCTCCCTTTCCCGCAGGGCTCACACTAAACTTGACTGCGGCCCAGCATGGATCTATCCTGGCCCAGGTCATGGCCTAGGACTGTGTGTCAGAAATGTCCTTTAAGTCTAGCCAGAGATAGCAGAGAAGAACAAGGGTCACTTCCCAGGTGGCCACACTGAGTTGGGAGCCGTGCTTAGGGCTGGCCTATATGGTATGTGTGGTTCCTCCCAGAAGGTGTGTATTAGGGAAAAAGGTCAGTCTGATCCCGGTACCACTTTGCGATCTACATCTGGGATCCAGAGGCGGTGGTAGGGCATTTAGATTTGTAGAGACGAAAGGAAGGCCTTTGAGGACCAGGGACCCAGCCTCGTCACGAACCCAAGGCCCTGTCATATACAGTTCTGTGCGTCTCAGATAGCAGATGGGTGACCTTTGATGGCAGATGGGAAGATGAGAGATGGGGATATCAAGGGTTGTCTTGGGCAGTCTGAGCACATGAGGAGGAGCTGGTTGGAAATGGAAAGTCATGAGGAGGTCCCCTGTGTGTCCCCCCGCCCCCACCCCTGTGGCCTCACTGCCACCTGTATGTCCCCAGGGCTGCAGCTGGTTTGCAGGGCAGTTTGGACTCTTCCTCTTATTGAGCGCACAGCTGCTTTCGCTGCCCTAGACAGGTGCAGAATCAGCACCCACATATGACAGCCTCCTCTACAAGATGGTCAGCTCTCCCTAAAAGTGGCACCAGAAGTTGTACTTGACACTCCTACCTACCTTCTTCTCTCTCTCCCCAAAGGTCCAGGTCACCATGACAGCCTGTCCATCCCTCATGCTGAGCACCCTGTCAGCTCAGCACATATGGACACTTGAGAGTAGGCCAGTTCAATCCTGCCCTCCTCAGCACCCCCTACAGGCACACCTGCCCGTGCGTAATGCCAGAGAGGCACAGACATGTGCTCTGTGGGGGTCCAGATGGAACAGGGAGGAGCCTTTGATGTGTTCCCTCAGAGGGTCCAGGACTTTGTCGAGGGCAGCTGGAGCAAGTGAGTTTTGCGGAAAGACTGCTAATGGAGACCACAGCCCTGGGCTGGGCCTTCACATATGTCACTACGCCAGGTCCAGGCTGAAAGAGTGAATCTGATGCCTCCTGTGACATTGTTGTGTGCAGAGCTCCAGAAGCTATGGCTCAGAGAGCTGACCCGTCCCATGTTTCCTCCCATTTCTGAGATTTTGTCTGGGCAAAGGGTTTTCCCACTGCCCCTGAGAAGACAGTTGGCCTCATCTCAGCCAACTCGGGTGTTATTTAACACTCCAGGACTGCGTGTAACTTGGTTGGGGATGAGTTCAGAGCATCTCAGTTTTGCAAGCTCTTTATAGTGACTCTGATGACTCTCATTCCTGTCATCTGTGGCAAAACTTGGCCTGGGGCCCTGTGTCTCTAGACCTGCAAGCCACAGTTCTTTCTGATAATAAACACGGACCAAGCAGAGCATTGGATCCTTGTGACTGTGGGTGGGTTCAGGGGGTGGGAGTTAGCTGCTCCCACTTCTATTAACACGACTCTGCCCTGAGCCCAGGTGACTCCTGGGTGGTCTGTCTTAGCTGATGTGTCCTGACTTAGGATGGTTCCAGGATCCAGTGATCGTGTGTGTGTGTGGCTTTGCTTTTCGGAGCTCTTGTTAACTTATAGACTCTTAGTTGTGCTGTCACAGACCAGGGCCTTGGGGGTGATGTAATAGATCTTTACGAAATTAGTGGTGGGCCCAGCAAGGGGTAGGTACAAGGGTATTCATGTCTTGAGTGTTAACCTATGCAAGCTCTGTGTTAGGTGCTGTGCATGCAGTAATTCTCAACCAGGGGCACTTGAGACATGTGAGGGTTTGGCAGTGCTCTCAGACATTCTAGATGAGCACAGCTTCATGATTGGGTACTCCTGGTTTGCAGAGGCCAAAGGTACTCGTATTATTGAACATTCCACACTGTACAGCAATCTCCTCTCCTAACACAGTCTCTGAATTCCCACAAGGGTATAATCAGGGCCTATAGACTTCACTAGTTTTACAGGGGCCCTGTGGTCCCCAAGGATAGTTTCAAGTCTGTCTGAGTGCAAGGCCTTTGTCCTGAGCTGGGTACTGAAGCAAGGCTGCAGGAACCGAGTCCTGCTTGTACTACTGTGATTTTGGAAGCATCCAAAGGTATGGGTTTGGATCTGAGTGTGCCTCAACACCCTGGTTCCTCCTGGGTGAAGCTGTAGTTTCAAAGTTGTAGGGAAAGGCAGGTAGAAATATGATGCTCTCTGAGTTCTAAAGCCAGAGCAGGAGCAGGGTCAGGTTGAAGAGCCTCAGCAAAATCAAAGTTGTCCTTCTAAGAGCAACATGTCTCTGGGTGGATGCTCATGGGTGTCTCATGTCTTAACTAGAACACCACAGCAGCTAAACCATGAGGAGCCCCTTCTGAGGGAGAAGCCCTTCGGAGGGAGAAGAGCTTGTTCTCTGCACACACACAGGGAAGTAGGGACATGAGAGACACAGGAAAAAGGGAAACAGGTCATAGGTGACAGGGTAAGCTTTCTGTGGTTGTAACATGATGGACACCGGCCACCAGTGCCACAGCCACACAGCCACTGCAATCTACTGTCGGCTGTTTAAAATTAAGTTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATGTATGTGTATCTGTGTGTGTGTATCTGTGTGTGTATCTGTGTATGTGTATCTGTTTGTGTGTATCTGTGTGTGTATCTGTGTGTGTGTATCTGTGAGTGTGTGTATCTGTGTGTGTGTATGTGTATCTGTGTGTGTATCTGTGTGTGTGTATATCTGTGTGTGTATCTGTGTGTGTATCTGTGGGTGTGTGTATCTGTGTGTGTGTATCTGTGTGTGTGTATCTGTGTGTGTGTGTGTTGTGTGTGTGTGGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCAGATGCCCAAAGAGGCCCAACAAATCCGTTGGAGTCTGAATAAGAGGCATTTTTGCATTACTTGATGTGGTTGCTGGAATCCAAATTCTAATCCTCCACAGAGAGTTGTAGGAAATGTCCTTAACCACTGAGCTGCTTCTCCAGTCCCTTAAGTGGCCGAAGCTCTTGTACATAGATGGAGCCCTCAGAAACTGGTCTGGTTGGGGAGAAGGAGGCAGCAGAGGTTGATTGAGCTCGAAGTGCCTGGTGCTCAAGGCTGATGAGAGGTAGGGTAGCCCTGCCCTGCGGTCACTGGACTCCTACCACCTCCTTCCTGCCTTCCCTCTGAGGAGGAGAGAGGGAAAGGCATCACAGTAGGAGGAGGGTGTGGTGGGGCTAGGCCGAGGTGGCCCCAGCCGTTCCCTTGCTTCCCAGATGGGGCCTGTGATTGGGAAGGAGGAGGACCACCCTCATTAACGGTCATTTACCCAATTATGCTTTGTGGGATATTCAACCCAAGGAACGTGCTGCCCCTGGCTGAGCGTAAGAGGAAGCCTAAATTCTCCAAGGAGGAGCTGGACATTCTGGTCACAGAGGTGACCCGTCACGAAGCGGTTCTCTTTGGGAGGGAGACCATGCGGCTGTCCCATGCCGACAGGGACAAGATTTGGGAAGGCATAGCTCGGAAAGTCACCTCCGTCAGCCAGGTTCCCCGCTCCATCAAGGATATTAAACACAGATGGGATGACATGAAGCGCAGGACCAAGGACAAGCTGGCCTTCATGCGGCAGTCACTGTCGGGCCCAGGGATCGGGGGCCACGCCCATCCCATCATGCTTGCTGCCCACAAGAGAGCTATCAAGTCAGCACTGCTCACTGCCAGGGCTGGGCACAGCTTCCCCAGGGCAGAGCTCGATGGAACCGACAGCCCTAACACCAGCTGTGAGTATCGCTGCCTGAGTGTGGGACTTGCTTCCTTGTGTGCACCTCTTCTCTTGCTATCTTTCAGCCCTGCCTACCTCCCTGGCTCTCTCCATGGCCCCATCTTACCTCTGACCTGTCTCCACTCCCTGAGCATCCCTTCTGTGCCAGAAGCTGGCTTGGGAGCAGGAAGGATAGGGCTGCATCTAAAACCCACACAGACACTTGTAGGACTAAACACACTTCGGATGGATCCAACCTGTGGCCTAAGGGTTACATGCACATCGCTATGAAGGTGGCCTAACCCAAATCATAGCCTTGTTTAAAACAGTACACATTTTTTGTTTGTTTGTTTGTTTGGTACCTGAGCAGAAACTTTGTAGTTGACCTTGTGTTACAATGTCAAAAGGTTAGGCAGACATACCTTCTTGAATTAGATTATCATTCACCTTAGAGGAAGAATGAGTGCTCACCCAGTCCAGCACAAGCCTTGGACTTGTGTGATCTTGGGGGCCCACGCTGGGTCTGCCGCCCCACAGTCTGTTGGGTCTGCAAAGCACATGAATGGAGTACTGCAGCTGCAGAAAAGGCCAAGGCTGGCTGAGGAAGATGCTTGAAGGTTGAGGAAGAGTTAACCAGGCCTGGTGTGAGGAGGGGAGGGGAAGGCGAGCAGGCTGGGAACAGCATGTACAAGGCCCACATCAGGAAGGCGCTTGGCACGTTCCAGGAACTGCAAAGGCCAGGGAAGCCCCATCATAGCCGGTAGGGGGAGGGGCACCACCACAGCAGCCAAGTGGCAGGCCAGGGAGAGAGCTTTCTTCATGATTGTCTGGTCACTCTGTGCTTTGTCCTCTACTCTCCAGTCTTCCGAGCTTAATCTACTTCCGTTCAGTTCCTGCTTCTTGGTGCTCACCTGAGACTGAGACCGGCTGGGCCCCCCTCTCCTGCCTCCTTTCCCGTTCTCTTCTGGCTCCCCTGCCCCACCCATTTTGTTTCCCTGTGTTCCCACCTTCTTGCTTCCTGGGACTTCAGCCAGTCTAGTTGGAGTTCACCAGAAGGGGGAGCCATTGGAGTCCATCCCTGAAGAATTCCACCCCACCCTCCCACTTGTTCACACACCCACACCCTTCCTCATCTGCTGTCCTCGATGGAGTCCTGTGAGCAAGGCAGGAGGATCTAAGCATTCAGCCAGCAGGAAAGCGGTTCACCCAGTCCGACTTCCTCCCTGGCCCTTTGCCATGGGGACCTGTTTATTTCCTGTTTGGCTGAGGTCTCTGACAGGTGGCCACTCACAAAGTCAGCCTCAGGAGTAGAAGAGAGTGTTCACGATGAGGCAGACTTCCTCGTTAGCTAGTTGAGGCAAATAATCTTCCAGAAAATGAAGGGGGCCCTGAGGCATCAGAACCAGACTTGAGCCTGGATCTGGCAGCGTTTGCTGGAGCCTCAAATCGGGCAGCATCGGGAAAAGCTTATTTCCTGAATCCTGCCCTAGCCACCACTCCATCTCCTAGAGATCAAAGCTGATGAGGTTAGCAGAGGTAACATGGGCTGCAGGAGCTCCCACATCTAATAGTCACAAGCCTTAGCCTGACTGGGCTTGGAAAAGGGGTAATGGCAGCTCAGAGTGTTCCTTCCCACCCTTTCTGGCACCCCAAGAGGATGGCTGCCATTTATAGAGCATGCTCAGGAAGCAGTAGGCTCCCACTGTGCCAGCATCAGGAAACCTACGGACCTGTGTAAATCAAGCATTCATGAGTAGGCCATGATGTGTCTGACCTCACAGCCCACCTCGCGGGGACAACAGGGCTAATGGCTTGCCCTTCATAATCCTGCTGAATCCTGCACCTACCGTTCCCTCTCATCTTCAGCCATCTGGCATCTAGCTCCCTGCAGTGGTTAGGATTCCAGCAAGGCCACAAGGTGGCCCCAAGCAACCTTGACAGTCCTTCCCTTGTGGAGACTGGTGCTCACAGAGAGCAGCTTAGCACCTCTTACAGGGTGACTCGGTCAGCTCTGCCATGCACCGTAGTGGGAGCCCCACTAGGAGCCCAGCCAGGGCCCCAGGGATTCAGCAAAGCAGACACCATTGTTTTTTTGAAGGTAGTGAAATATAATCAGGGTCATGAACCCTTAGACTGGCATGGCTGCCACTGGAGATGGGGCCTCCTTGGACTGGACTCCTTTCCTGGAATGTAGCTGCTTCTGTGGGAAGAAGGGAACCAGCTCCTGCTCATCCTTCTACCAATACTGGACCTCCATACCTCAGGGACTTAGAAGCTGGCATTTCTCTGTGTGTGGTGCCAGTACAGGCTAAGGGGTGTACAGCAGGGAGTTTCAGAGGCGAGCCTGTGACCCGGGCTGCCCCTTCGCCCTTTTGTAATCATCTGTCCTTCTCTCCTTGTACACTCCAAGATGATGAAGATGAGAAAGCTCCTGGGCCCTCACAGCAGCCTCTTCGGATGCCCCTGCTACGTTCTCCAGAGGAAGAGGCCCTCCTGGCCAGGCCCACACTGCTCTGTTCATCTTCCTCAGACCAGTCCAAGATGCTGGGCCCTAAGCCAGAGGTCCTGCCCCATCCCTCACTCCAGGCCCAGGCATGCAGGACCCCAGAGCCACATCCCAATTCACCCACCATGAGCCTGGACTGGCATCTCCTGCATGCCCGTGCCCATCAGACCGAAATGTTCCAGAAGTTCTGCCAGGAGCTGGTGACTGTGCACCAAGACATGGCTGACAGCATGCATGTTATCAGCCAGGCTATGGCTGAACTGAACAGCCGTGTTGGTCAGATGTGTAAGACACTTATGGAGATCCGAGATGCAGTTCAAGCATCTCAGCATGGGCCAAAAGGGGCAGCTCCCATTGACTGCACTTTCCAGGCTCAGGCATCCCTGCCGGACCCTACAGCAGCTTGCCCAGAACCAGCCCCAACACGGACTACCAGGTCTCGGAAGAGAAAGCACAATTTCTAACATGGCCAGTTTGCATAAGGAGAAGCAATGCCGGTGGTGTCTGGCCTTGAGATGGGGGAGTCCCTTGTGTCCAGAAACGAGACCGATGACCCTGGGGCACAGTCATCTCTTCACCTGATGCAGTACAGCTTCCTGTGCTTTAACAGAGTGGGTATACAGCCCACCCCCATATCTCAGGAAGATGCTCAAGACACAAGAAAAGCTGCCTGCTTGAATGCTTGCTTGGCCTAGAAGGTTGCTCTCCTCATGGCCTGTATCCTGTAGCCTACGGAACAGGCCTTGCTGGGGCAGGGGGGCAGCATCCAACAGAATCTTGCTTCCAACTCAGGGCTGCAGCAGAGCTAACCTCCCAGGTCCTGATTCTGCCCTGTTCCCAGGTGGCGCGGCCTGTGGGTGGGCGGGGCTGGCTCAGCTGGGTGGGTGGGGCTGGCTCAGCTGGGTGGGTGGGGCTGGCTCAGCTGGGTGGGCAGGGCCCTAGCCTTGGTCCTGCGCTTGCCAGACATTGCTCAGCTGCTGTGCTTGCCTTTTGTGGGAGGAAGGAGAATGGGCGTGTGAGGAGGGGAAAGAGATGATCTGGCATTCTTAGCATACTGTAAGCTTTTCCCCAGCCTGCACATGACAGGCCATCTCAGGGAGCTTTCTGAGCAGTGAGAAGGCAGCCAAGTCAGTCTTTGCAATCACTGATTACTGGTCATTCCAATCCTAGTCATGCATCTCAGGGTTCAGAAACAACACAGCCATGTAGTGGGGACCTGGCCAGCTTTCATCAAGAGGCCAGATGTGGAGTGCTAATAGATGGGGATCTTCTCCTCACCCAAGCCCTGCCTTAGCTTCCACAGTTGGAAGAGGGAACAAAAACAGCATGGGGATGATTCTGCCAGCCTGTGATGCCTTGAGTCTCACAGCCAGCGGTGGGAGGTCCCGGGCTCAGGCCTCGGGAGCCAGCAGGCACACTGTCCACTCACTGGCTCTGAATAAGGCCGAGACCAATGAGGCTGTGTCCAGTCCATCTCCCAGCATGCTTTGCCTCTGCTTGCTTAGGCTGTATGTTCACTTAGCCATACACACTTCTAGCTTTGTGTTTTGCTTAAGGGACATGGTCAGAGAGCTGGGTTCTTGAGTTAGGGAGGAGAAACTAAGCCAAAGGCTTCACTCTGACCTAGGTGCAGCTTTGTCCTCCCTCCCTGGCCTGAGGCCGACCCCAGCAGACCTTTCACACCCTTCCTTTCTTCCTGAGAAACTAAGTGGACCTGGAAGCCCACTGGACCCAGTGCCCACTGAGGCTGTTGCTGGAGTTGTTTATAAACACACACCATGCTTTGTCTTACATGAAATGATAAACGGATGGCTCCTGCTGTGTCCCTGGGCCCTGGGCTTCATTGCCCCAATTTGTGGTTCTTTGGTGGTTCCTGCCCCATCAAACTGCATATTGTCTTGTCCAGTAATAGCCTGGTGCCTGGATTGCCCATCTATGCTGGAACCCAAGATGGCCTTCTCAAATAATTTTGTTAAGATGACAATAAAATGAATCAGATGTCACACTTTGAACACAGCCAGGCTCCAGAATCTTTTTTTTTTTTTTTAGTGTGTATTCTCTTTCTTCATATCCCAAGGAGACCCCACAAGTCTCCAGAGCAGGGGTTAGACGCTTAATGGAAAGTGTGTGGCGACGAGGGTTCTGTGGTCCTTGCATATCCTGGATTCCATAGACTCCCCATGGGCACACCCAACCCCATGCTTGCCCTGCAAAGGAAAGACAGTGTAGGCCAAAGGCAGCTGAGCATCCACGGCTGCTAGGTCAACTTTTCTTTTGTCCTGCACATCAAAGGTGACATAATGTTCAGTGAGTTTAACCTTGTGCTCCCCAAAAGTGTTGCAGTTTCCAGGGAGTGAAATAGTTTCTGACTGGAGACTTGAGAGGCTCCTGGATGACCATTAGGGGCCATCCTGGGACACACCTCTGTAGTGGCTGCATCTCCACTGACCTAGGCAGCTGCCTGCAAAAGGTAAGGCCCTGCCTGCCAAGAATTCTCAGAGGGACTAGAGCGGCTTCCTCTTGCATTCACTAGAGTGTGCCCCACCACAGAGCTGTCTTCTGACCACTCACCAGCCTGGCTTACCTCCAGCTGTGGAGAGAGTTTCCTTGAGTCAGGAATCCCCAAATCATAGACTGTAGTGCCCTTTCCCAATAGTTCTTAGCTTCGGAATCCAGACCATTCTCTTCAGTTCCTGAATAAAATATGACCATGGAAATTAAGATGGCTGTTTGCAGGAGATATAGAGATCCCATGCCGCTGGCCTGGCTCTCCTCTGATGCCCACAATTTGTGAGACTGGTTGGCCTCCATTTCTGGCATTGGGGAAGAAGAGGCCAAATTGAAGGCTGTATACCAGAGACAAGGTCACAGTCCAGGGACAGCGGTCAGTTTGAGGTGGAAATGATTTCCATTTTGGTGTCTTGGTGACAGTGGGGACCAGGAGGCCAGAATATTCAATAGGAAAAAGAAATGACTGGGGAGCCTGTCCCAGCTTCCTCAAGGGAAGCCTTAAAAGGAAGCCACAGCATATGGGGAGCATATTTTACAGAGACTGGGCCACTGCATGGACACCAGAGCCCTAACCCAGTGACATCACAGAGACCAGCTCCTCTTGTCCAGTCTTCCCATTTTCCTCTTCCCGGGCAACTTCCTTTCTGGTGGAAAGCTATGTTGGCCAAGACCAGCGTGTGTCAGTCCCATTAAACAAAGTGGACGTCTCCATGGGCCATTCTCTTTCTTGAGTAGGAACCCGTAGTCATTTCCTGACCCAGATAGAAAATATGGTACACTTGATAAGACCCAGTGGGTGAGGCCTGAGAATTGTCTCCCGGTGCTTATCTGTCCGGTACCCAAGGCCAGTGCGGAGACAGGACTCAAAACAATGTGTTATCTTCTGGAAAGATTCAGTCCAGGACCCCTGCCCTCCCCACCACTGTCAGTCACCTTTCATTTACTTCTAGGGTGCCTGAGTCTGAACTGCCAGATGTGAACTCAGTCTCTGCAGGACAGCCTGGGCCCAAGCATTTAAGCATTTCCCACTCAGCTCTGTTTTCCCAACAAGGGAGGATGAGCTGGGAACTCAGATCCCCCTGTAGACAGCTGAGCTTGACCACAAGGAGGAGACAGTTCCCGGAAACCGTGGGGTCCTTGACTGTGTGACACAGGACAGTATTTCATAAGAATGAGCACAGCAATTCCAAGAATGTGCCAAGCCTTTGAGTGTTACCACTATAAAGGGAGGGGGCTGAATTAGAGGTGATGGGTCCCCAGTCTTCTCTGGATGCAGTTAACTTTCTCTTGAAAGTTCTGTCACATAAACATGTCTTATTGTGGGACTGGGTGGCTGTGATTCACCCACAGTTGCCATATGTATCTCATTTCTAAAGCCAAGTTTTAAAACAACCAAATGCAGGATGCTCAACACATTTTGGTCTGATACTGGAAATACTTTGTGATCTGTGGGAAGACTAAGGGTGCTCTTTCTAAATGCTGGTTCTTGTTGGGTAGAACGACAGTGGGGGTGGGGTAGGGGGTGCGAAGGGAAATGGATACAAACCGTTTGAAATGTTCAGACCCATCCCAGACATGGCTGTTTTGCATCAGCAAACCTTGACAGTGGACTCGTTCCTCATTTACCTTTTTCTCAGGTATTTAGTATTTGATGACTGGCCAGTATTTGATGACATGTCTGGCTTCTGGATGTGTCTGGAACAGAAAAGCATCGAGCTACATTTATTCTTTGCCCTGCTGACCATTAAGATGGTTGGTTTTGGACATCACTCCCAGACTCTTGCTATATAGGAAACTTGGAATTATTTTGCACAGGCAAAGGAAATTTCAGGGTTGGAGTTGAGGCTGGTCCTTTGAGTGGAGCCATGAGGCCGAGCGTGATTTCTGTAGTCGTGGGGTCGGTCTTTTGCCCTTGCTAACAGTATTGTGCTAGGTGCATGGAGAGCCCCATGAGATTCTTCACAGCTCATGGGGGCCTCTCGGATGCTCATGTAAGATACTGATGGAGATACCGGTGCTGAGGCTGAGGTCCTGGGCAACATGTCTGACGAAGGGCTGTAAGCACCATTGATCTTGTCCAGATTGGAGGAGCTTGGCCTTTGTTCTCCCACTGCTTGGGTCTTCATCCCTCGGCCTATGGTATCTTCTGTGGCTAGAGTGGATGGTTTCCTGGGCTTCAGGGGATGTGTTTGTAAGGTGCCAACCTCCTCCAAGGCTAAGTCAAGCTGATTCCGCAGGTCCTGCCCAGATAAGAGAAGGGTGGATGTGAGGACTGCAGGCAATGCCCCACGGGTGGTGTGGTCTCCAATGTGAATGTTCTTGGAGCTGCCGGCCCCCATTGTCACCTTGCAAAGGATCTGATATCTGTGTAAATGTTTTTTCTTTGCCTTTTGGTTGAGAGAAGCCGCACAAACTTTATTGAGGAAACCAGGAAGGTACAGACAATTCCAGAGACGATCCACCCCAAACAATGGTGTACGTGGTTAAAACATGGGTGTGTTTGCTTCAGGCTGTTCTGCTGGATAGACGCATTGTAGGCACACAGTGGACATGGCTTTGCCTCCCACCCGCCTCACTTGGCATCACAGCAGCACTGTTTGGGAGTTGGGCAAGGTGATACCGGGATGTTGGAAGTGTCAATCTGAAGGAGACTGGGTGAGAGATGTGGATTCACTGGTGTCTTGGGCATTGCTGAGTCCATGCACTCCGTGTCCACATGGAAGCCATGAGTTGTGGCTCAGGGAAGGATAGGCCACAACGCTGCATCATTAGCTGTGTCTTTGGACAAGTTTCCCGGCCTCGCTGAGCCTTCTGTCCTTGCAGTCTCTTGTTTAACTTCCCCCTTTGTCCCCGTTGGACCAACTATAAAGACGCTGCTCTAAAATAGACCTATTGCTGGTCACTATTAGAGCATCAGTTATTTCTACTAAGCCTAGAGAAATATGGAAACAGCCCAAAGCTTCCCCCGCTCTAACCGCTGTCAGAGGCCTGAGGTTCAAAGTCAATGAAAGTGGAGCTGGAGCATACGTGGCTCAGAGCTGAAGAGCACCGACTGCTCTTTCATAGGACCCAGCCTTGATTCCCAGCACTCATATGGCAGCTCTCAACCATCTATAACTCTGCTTCCAGAGGCTCTAATGCCCTCTTCTGGCCTCTGGGCTCTATTCATATGGTACACAGACGTGAGTACAGGCAAAACACCCCTACACACAAAATACTGATATAAAATAAGTTGTTTTTAAGTCAGTAAGGAGGGTAAGGGATAGCCACCTACTGTTGAGCCTGGTGTTGGCTGTGACCCTCGAGGCCGGCAGGGCAGACATTGTTTCTGGTCTCAGATTAAACAGTCTTAAGGTCCAGAGAATGTGTTCACATGATGCAGAACAGAGATGCCGGAAGGAGGGCCAGCTCTGGTTAGCTGTCTCTCTGTGCCCACATACCTTAACCTCCTGGGCCCTGCACTGGAGGCACTCAACCAGGTGTGGCCCATGGTTCTCACCTGTCCCCTCCCCACCAG
Seq C2 exon
GTACGTGGTCATTTCCCGGGAGGAGAGGGAGCAGAACCTCCTGGCCTTCCAGCACAGCGAGCGCATCTACTTCCGGGCATGCCGAGACATCCGGCCAGGAGAGCGGCTGCGGGTCTGGTACAGCGAGGACTACATGAAGCGTCTGCACAGCATGTCCCAGGAAACCATCCACCGCAACCTGGCCCGGG
VastDB Features
Vast-tools module Information
Secondary ID
ENSRNOG00000008674:ENSRNOT00000066526:4
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.087 A=NA C2=0.477
Domain overlap (PFAM):
C1:
PF138731=Myb_DNA-bind_5=PU(33.3=91.3)
A:
NA
C2:
PF0085623=SET=PD(43.6=64.1)
Main Inclusion Isoform:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]