HsaINT0131367 @ hg38
Intron Retention
Gene
ENSG00000019485 | PRDM11
Description
PR/SET domain 11 [Source:HGNC Symbol;Acc:HGNC:13996]
Coordinates
chr11:45204711-45219757:+
Coord C1 exon
chr11:45204711-45204778
Coord A exon
chr11:45204779-45219569
Coord C2 exon
chr11:45219570-45219757
Length
14791 bp
Sequences
Splice sites
5' ss Seq
GAGGTGAGC
5' ss Score
8.7
3' ss Seq
CTGTCTCCCCTCCCCACCAGGTA
3' ss Score
11.35
Exon sequences
Seq C1 exon
ATTGTGGACAAGAACAACCGCTATAAGTCCATAGATGGCTCAGACGAGACCAAAGCCAACTGGATGAG
Seq A exon
GTGAGCCCTGCTCTGCTGATGTCCCGGGGGTCTTGCCTGGCCTCTGGAAAGGAGCCAAGGGAGTGTGTTGGACCTGTGGGAGCTCCAGTGGTGGAGACTTCTGGAGGCTGCCGTTTGCAGGGTTTGGATGCATCTAGCTCTGAAGGACCCACCTTTTCCCCTAGGCCTCCATCAGGGGGCTCTAGAGGACGGCGTGTGGTCAGGCCGTTGGGATGCAGGGACCGCTCGGGCTGCTCACTTGCCAGTGTGTCTGGAGGTCCTGGGCCCCAGGCTCCTGGCAGCATTCCTAGGGAGGAGGAGGAGACTGTCCCCCACCTAGGACTGTGACACCTCAGAGCAGGCTCCTGCAGGGGTGGTGTGAGAATCGTCCCAGTGCAGCCCCAGCAGTTGTTTAAACAGCCTCCATGGAAGAAAGGGCTCTGACAAAGTCTTCAGCTCAGTTTTTGACAGTGTTGCTGCCTATGTTTGAGTACTTTGAAGTGTCAACTTTACCCTGTTCCGGTGTTTGGGACAGAATTTTGCACCAGAAGTTTTCTTAAATGCCAACCAGAGGAGGCAGGAGACTGGCCCCAGGCAGGGTCACCCAGGGATGGCTGAGCTGAGCCCAGAACCATGGGTCCAGCGTGATGCTGATGGTCTGTGCCATGTGCGAGGGACTCTGCCTGGTGGGGTTTGTGGACAGGGGTGGGAGATCTGACATGCCTTGTTGCCTGCTTGGTGGCCTCTCTCTGGGACCTAGGAGCACTGGCTGGAGATTTGGATCTGGGTGGGAGGGGAAGGAAGCCTCAGATGTCTGGAGTCAGGGGCACAGCCACACCATGGGCCTGGGGCCCTCTGCCGGCATTTGCACAGTTTTCTGACCCATGAGGCCTTGAGGCTGATGGTGGGATTGTACTTGGAGAGAGGGCAACTTCCTAAAAAGGAGTGTGCTGTCTTAAACTCGGAGACTTTCTAAGCAAATGAGGAGAAGCAGGTTTGAGGCGTAGAGTATGTGATGAGGGCTCCTGTGTCCTTCCCAGTGGCTCCACTGCCCACCTATACTCCTATCAGAGAGTGGCTGAGCAGCAGTTCACACCTCCCAGATTACTTTAGCGTTCGCCCTCTTATGGGTTAGGGAAGGTGTTCTCATTGCCGTTTGATGGGTGCAGAACAGAGGCTCCAGAGACCAGCGGGCCCCCTGCCTTGCAGTGTGGAGAATAGCACCGACTGCCCCCAACCTCCTTGGACACAGCTGATCCGACACTGCCCTGAAAGTGGCCCCAGGGAGGTGGCTTGACACCCTGACTGCCTTCTCTTCTCACTGCCACGGGGTCCAGGTCAGCTGAGCACTTACAGTTCATCACCTGTGTACTGAGCACCTAGTTTGAGTCAGACTGTGAAATGGGTACCAGGGTGGATCACCCAGCCCTGCCCCACCACACCCCATGCCCCACCCCCGCTGGCCCTTCCCGGGCTCACACCTCCTACCACAGAGGTGACTTTCCAGTGTAGTTTTTGCACCGAGGCACAATGTGCTGCAGAGGCCCAGATGAAAGAGGAGGGGTTCGTTGACATGGGCCTTCAAAGGGGCCAGGATTGTGTCTGGGGACACTGGGTTGTGGTGTCTAGTCAGGCTGTTGGGCGGCTGCTCAGTTTGGACCCCAAGCCTGTGCTGCTGTGCTGCCTGCCCTGTGGCTGCAGCCTGGCTCCAGGCAAGCAGGGGAGACCGTGCGTGTGTCCACTTGGGAATCAGGCTTTCTGTGCTATTGCTTTTAAGGCGCCGGGAGCTTTGCCCATAGAACCGAATCTGTTCCACTCTTTCACCCATCTCTGATCTTTCCCCCTGGGGACAAGGCCTTCTCAAAACCCCAAAAAAGGGGAGCTATCATCCAAACTAACTTATCTATCCTCTGGCACCCCGCAGATTGTGACTTAATTGGGCTGGGGATTGGCCTTGGGCCTTGGTATTTTTAAAGCTAGTGATTCTGATGTGCCACTAGCATTGAGAACCACTGCTCTGTACAGATCTTCATGCCACAGTGGTCAAGCTGAGAGCAGGGCAAGGTCTTGCTTAAGAGCATACAGTCAGGGTAGCAGAATCAGGATTTGAACTCCTGGCTCTGTAATCCTAGGTCGGTGTTCTTCCTGCTTGTGCACAAGGGACCAGGTGAAGCGTGGCTTCCTGGGCCTGGATGGGCACTGGTGAGCAGGGGTTTGGGGGTTTCTGCTACTGCCACCTTGCTAGCATGGTTTCTGTCCTGTTCTGCTCCCAGCCTGTCCTGATTCAAGATGGCATCTGGGTAGTCACAGCTGGTGGGCTCTCATCTTATGACCACTCAAAGAGCAGGTTTGGGTTAGGGATGCAGTTTGTTGCCACGGAGACGCCCCTCCTGTTGCTGTTGGAGTGACGGGAAAGCTGTTAATCCTGGGAATCCTCCTTTCCCTTCATGTCCAGCTTCCGTGGTGTGGCTCTTTCTGACTTGCAGATGCTCTCCTTTGCACTGTCATGGCACCGCTTGGGGATGATTGAATGGACTCTGTTAGTTTCTTAACAAAATTAATGGTGGGCCAGGAGGCGAATGGGCACTGTCGTGTTGAGCTTATCTTTATGACAGCCCCATCTAGGTGATCTGTCTGTGGTGGTTCTCAACCGAGCACTATTTTGTGCCCCTGGGGGCATTTGGCAAGGCCTGGAGACATGTTTGATGGTTGGATGCTATCAGATAGAAGCCAAGGATGTTGATAAAATCCTGCATTACACAGGACACCCCTTCCCCCCAACGAAAAATTTTCTAGCCCCAACTGCCAATAGTGGCAAGATTGAGACACCCACATTAAGTCCTCCTGATAGCCCTGGACAGTGACACTAGAATTGTCACCCTAGTTTTATGGAGAAGGAGACTGGGTTCACACGAGTCCCATGGCTTGGCCCAAGGAGACTCAGTCTCTAGTTCCAGGTCTAGTCCCATATTCCTGCCACCATCTTGGACTGGGTAATGAGGCCCCCAGCCTTCTTCCCATCTTCTGGGCCCTGGTGTTTTGGGTGCTTGAGTAGGAAGGTGAGGGCTGAAGGATGTTGGTGCCGCCGGCCTTCCCCTCTTGGTTTCAGAAGGAAACCAAGGAGTGAATGCGCTCTGAGCTTTCCTCCATACCCTCATGTCCTCTCTTGGGTGGATTTTTTCACCTTTTATCACTAGTTAAAAGGGTGACAGAGCCACGATGTGGAGAAATCAAGTTCCAAAGCCAGAGCAGGAGCCAAGTGGGATGGAAGGGCCATGCTGTGCCCCTTGCCCAGGGCCTCTGGCTGCTCAGTTGAGAGGGAATCCCAGGTCCCCCTGGTGTCCACCAAAGTGGAACTTGACTCCCTCAGGACAGTCGTGGGCTTCTCAAATTCTACCAAAAAGTCACAGCAGCCCACCCCCGAAGAAAGCACTCCCATGGGAAGGAAACCTGTTTGCCTGCACATATGCAAAGGTGGGGGCTTGGAGAACTGACCGGGACGGGGAAGGGGAAGAGAGCCACTAGGCAGAATAAGCTTTCTGTGGCCACACCCTAATCATGGCATTGTCACTGCTACACCCAACGGTAGCCAGTGTAAATAGTTTCCCTGGTTACGTATTCTTCCGAGCCATTCATTCAGCTGTAGGGCTGTAGGTAAATATCGCTTTATAGAGGCAATGGGCTAATCCTAATTTCAATAAGATCCTTTACTGCTATCTTTAAGAGATTTTAAGCCCCTTACATCATGATGTGTTTCCCTCCTTAGTAATAAACCCGAAGAGTTGTGGTTGTTATTCTGGACAGGGAGAATAAGGTGTGAAAGGTTGAACATGAACTGCCCTAGCTCTCACCGCTAGTAAGAGCTAAAGCAGGCCCTGAAACCAAGGCCTTCGACTCTGAGTTCAGTGCTCCCTCCCATGTAACGCCGTCTCTTCTTTCCACCCTCCCCTCCGAGGAGTAGTGGAAGGGACCTCTCAGTAGGAGGAGGGTGTGGTGGGGGCCAGGTTGCCCCAGGTGCCTCCTGGCTCCCCAGCTGGGGGCCAGCAATTAGGAAGGAGAACCACCTGCATTGACGGTCATTTACCCAATTGTGCTTTGTGGGATATTCAACCCAAGGAATGTGGCACACCTGGCTGAGCGTAAGAGGAAGCCCAAGTTCTCCAAGGAGGAGCTGGACATTCTTGTCACAGAGGTGACCCACCATGAAGCAGTGCTCTTTGGGAGGGAGACCATGCGGCTGTCCCATGCTGACAGGGACAAGATTTGGGAAGGCATAGCCCGGAAAATCACCTCCGTCAGCCAGGTGCCCCGCTCCGTCAAGGACATTAAGCACAGATGGGATGACATGAAACGGAGGACCAAGGACAAGCTGGCCTTCATGCAGCAGTCCCTGTCGGGCCCTGGGGCCGGGGGCCGGGCCCCCACCATCGTGCTCACGGCCCACGAGAGGGCCATCAAGTCGGCGCTGCTCACGGCCCGTGCAGGGCGCGGCTTCCCCAGGGCGGAACTGGATGGCACCGACAGCCCTTCGACCAGCTGTGAGTATCACCAGTCCCCCCCGCCACCCAGCCGGCTGCCTGCCCCCCAGCTTACAGTCCACAGTCTCCCACCGACTTTCCCTCTGGTTCTCTCCTGTCCCTCTCTGTCCAGCCCACTCTTTCCATCCTCCCCTCCTTCTCCCACTCTTCTCCTCTCCATCCCTTTTTGCATTCATTCTCGAATATTTACTGAGCATCTCCGTGCCAGAGCCGTGCTAGGAGCTGGGAAGACAGCTGTGTGTAAACCCCACGCAGGCCCTGCTCTTGGGGAGACCCTGGACTCCTAGGAATAAACCAACGTTAAATAATTGCACGAGTAAACTGGAAACGAAGGGATGGAGGACACAGGAGTCCAGGAGGTCCCGAGAGCAGGGCTGACTTCATGAGCATGCAACCTGAACAGTCACAGGGGCCGCGGGGTTTCAGGCTCTGCTGTCGCCATCTGGACATTCTTCATAGTTTTTGAGCCAGGGGCCCCACGTTTTCATTTTGCATTTGACCCTGCAGGTTATGTAGCAGCTCTGTCTGAGAGTTAAGGAGTGGGTAAAACTGGCTCCACTGGGGACTGGGGAGGGCTCCCTGAAGAAGTCCAGCGGACTAGGATGTGAAGAGTAAGAGTTAACCAGGCCAGGCAGCAGCGTGGGGCGCGGAGAAGGGGAGGGGAGGCGCGCAGGCAGAGAACAGCATGTACGAGGCCCCGCATCAGGAAGGCGCTTGGCACGTTCCAGGAACAGTGAGAAGCCAGGAAAGCCCAAGTGTAGCAGCGCGGGGGAGGGGGCTGGAGACGAGGCGGCCAAGCTGTGAAGGCCCGGGCCGGGCCATGGAAAGATCAGTTCCTTTCTGTGTCTGGTCCTGACTGCTTTGTTCCTCTATTATTACTCCCCTGCCTGAGCCACGCTGCCTGCCCCCACTTTTCTGTGTGCTGCCTCTCAGCTCCCTCTCCATCCTCCTGGCTGCTCCGCCACCCGCTCCCCACCCCTCTTCTCCCTCTGTACTTGTCCCTGCCTTTCCTCTCTACTTCCTGTGTCTCACATGCACTTTGAAGCCAGGGCCCCAGCGGCCGAGGCGGGTGTCCCTTGGGGCTGGAGTTCTAGTTGGGGCTCAGCAGAAGGGGGAGCACTAAAGGCCTCCGCAGGGACTGCAACCCTTCCTTTCCACTTCTGCACATCTCCCCCGTGCCCCGCCAGCTGCAGTCCCCACTAGAGGCCGTCTGCCTGACCGGCTCGTGAGTGGTGGGAGCCAGGCAGGAGGGGCCCCAGGGAAGCAGCCGTGGCTCAGCCCATGGGAAGGTGCTTTGCAAAGACTCACTTGCACCTTCCCTTCCCGGGCCCCCTGCCATTGTGATCCACTTGCTTCCTGTTTGGCTGGGGCTCCTGACAGGTGGCAGTTCACAGAGTCAGATGTTTAGGACTGGAAAAGAACATGGAGACCATTTAGTTCAACTTCCTTGCAATGCAGAAAGTAAGCTCTGAAAACCAAGGTGGCCCTGAGCTCAATTCAGAAGCAGGACTTGAACCCGGGTCTGCTGGCTTCCTGTGAATCAGTGTTTTCCTAAGTCTTAAGAGGATTCCACCCCGTGATAAGAAAAAATGGGGGGGTCAGCATCCAGTAAAGCCTGTTCCCTGCATCCTGCTCCGCTCACCCCTCCATCTCCCTGAGACTGAATGTAATGAGGCCACCAAAGGTAACCTGGGCTGGCAGGGAGCCCGAGTGTGCCATCAGGCAGAGCCCGCTCACCCCCATGGCAGGCTCACAGCCCTCCTTTTCCTGGCAGTGGCCAGCTGCGGCAGCACTCGGCCAGGGGCTTGGCAGAACGGGGACCTGGGAGGGAAGGAGCAGCATCACCTCGCCGGGTCTCACTCCTTCCAACACTGGCCATGCTAGACAGGTCTCTGGGATCTCAGGGGATGGCTGCTGTCCCACCAAACACTGCCAAGAGACACAGGACTCTTACCAAGCTGGCCCAAGTGAGCCCCCAGGACCCCTGGGAGGCATGAGGTAACTGTAAGATAAACCTGTCTGTCCTCCCCATCACCTTCCTGGGGGGTGGTTCTGAGTTGAGTCCGCAGATCCAGGCAGGGAGGGCTTGCCTGTCAGTAGGGTCAGCCCATACATCATTTAATCCTGCCACAGGGATCAGCCCATACCCTTGGTCACCAGAAAGCAGGACCCACATGTGCAGAGGCTGGGCCCCCTCCCTGTGTCCGGCTGCAAGGAGCAGTCTGTCCGATGGCCCCTGTGGATGGGAGCACGATGTGACTGAACTGGAAGCCTGCCTTGGGGGACAGGGGGACAGCAGGGCTGGTTGCAGAGGTGGCTCTCCTGCTCTGCACTGTCCTGCCAGTTTCTTCAGCCTGTCAGCATGTGCTGCAGTGATTTAAAGATGCAGATTCCATATTAGTAGTCTTTTATCCCTCACCCCCTTCCCACTCTTCCCCCCAAGTCCGCAAAGTCCGTTGTATCAATCTTATGCCTTTGTGTCATATGGCACAGTGTATACTGCTTGGGTCATGGGTGCACCAAAATCTCACAAGTCACCACTGAAGAACTTCCTCATGTAACCAAACACCACCTGTACCCCAATAACTTATGGAAAAAAAAGTGTGCAGATTCCAGCAAGGCCACAGGATGGCCCCAAGCAATGCAGACGTGGCCTCAGAAAGTCTGGTGCTCAGAGGGCCAAGAGCGTCTTAGTACCTTTAGGCAGGTGCCGCTCCTTCAGCGTTACAGAGCACCTTCATGTTTGTCATCTTGTTTATGACTCTTCTTAACAACCCAATTAGGTAGCCAAGCGGTTCGATGTGTAGACAGGGCAGTCGTTATCATTGCAGAAAGTGAGGTGCAGAGAGATGAACTGACTGCTGAGGTCAGGAGCTGCTGGGTTGGCACGCAGCCGGTGGGCCACGGTCTCCAAGTCCCCTGGCCTGGGCTCTTCCCCACTAGAATAGAGCTGTTCCGTTGAGAGGAAGAGGAACTTCCCCCCAGGGATGCTGGGCCCACGCACCTCAGGGATTTGGGGAACGTGGATTTCTCTATGGGCGGGGGCCAAACTAGACCGCAGGGTGGCAGGGCAGGGGGATACTCAGGTGTTTTTCAGGGGCAGGGCCAACCCCTGGGCCTCCCTCCTTCTCCCTTTTGTAACCACTTTTCCATCTTTGTTTCTGTCCCCCAAGATGATGAAGATGAGGAGGCGCCTGGGCCCTCAAGGCAGCCTCTTCGGGTGCCTCTGCAGCGGTCTCCGGAGGAAGAGGCCCACCTGGCCAGGCCCGCCCTGCTCCGTTCATCCTCCTCCTCAGACCAGTCTGAGACGGTGGGCCCCAAGCCAGAGGCCCTGCCCCATCCCTCGCCCCAGGCCCAGGCTGCCTGCAGGACCCCTCGGCCGCACCCCAGCCCACCCACCACGGGCCTTGACTGGCAGCTCCTCCACGTCCATGCCCAGCAGACCGAGGTGTTCCGGCAGTTCTGCCAGGAGCTGGTGACCGTGCACCGGGACATGGCCAACAGCATGCACGTCATCGGCCAGGCCATGGCCGAGCTGACCAGCCGTGTCGGTCAGATGTGCCAGACGCTGACAGAGATCCGGGATGGGGTTCAGGCATCTCAGCGGGGGCCAGAAGGGGCAGACCCTACGGGCTCCACTCCCCAGGCCACCCAGGCCCAAGCCCCCCTGCCAGAGCCCCCACCAGCTTCCCCAGCATCAGCCCCCACACGGACTACCAGGTCTCGGAAGAGAAAGCACAATTTCTAACCCAGCTAGTCTGCACTAGGAGGAAGAGTCATGGAGGAGGGATGTCTGGCCTCACAACAGGGGCCAGTCTTTCGTGTCCAGGAACAGGATCGATGACCCTTGTAGGACACTGGGGGCGCTGTTACCTCCTCACCGAGCGCAGGTCGCTGCCCTGTGGTCTAACAGAGCATGTATTCAGACCCGCACCCTCATCTTTGGCGGATGCTGAAGATGCAAGAAAAGCCACCTGCTTGATGCTTGCTTGGCCTGGAGATCGTTCTCCTCTTGGTCTGTGTCCCGTGGTGGCAGGCCTTGCAGGGAGGGGGGCGCAACAGTGGGGAGCATCCGAATGGAGTCCCACTTTCCAACCTTGGGGCTGCTGCATCGGCCTCCCACATGTGACCTCCCAGGCCCTGATGCTGCTTCTTTTGAAGGGGGTGAGGCCTGATGGGCAGGTCAAGTCGGTCCTTCAGGGAGGGGTCTACCCTCCCTTGCCCGGGGGTGGTGCCCGCCTTGGCCCTCCGCTTGCCCTTGTGCGCGTGCTCAGCTGCTGTGCTTGCCTTTTTTGGAGTGGGGAGAAGAATGGGATGACGTCGGAGGAAGGAAAAGACTGTCTTGCATTCATAGAGAGCACTTTATGCTTTTCCTCGCCCTTGCAGAGTCTGGGTGGTCTCAGTGGGGGCTCAGGACAGTCAGCTCAAGACAGCCAAGTCAGGTATTATTATGATCATTTTTATCATCATCATCTGTATAAGACAAATGACACAGCCAGTTAGTGAGAGGGCCAGGACTGGAAGCCAGGGTATCGGTTTTCCCAGCTCCCCTGTCAGAGGCCAGATCTGGAGTAGTGGGAAGAGGAGGCAGGGGGCAGGTCTTGCCCCTTGCCAGGCCTCTGCCCCTTGCCAGGCCTCTGCCCCCTGTATCTCTGCTTCTGCCTCAGCTGTCCTGGGTGAGGTGGGAGGCACCTAGCATTTAGCAGGTGATTCTCCCACCCTGCCCTGGCTCTATGGCTCATAGCCAGTGGCTTGGAGAGGCAGGGCCAGATCTCAGGAGTGGAGGGCAACCTCTTCCCTGGCTTCTAAAAGAATCCAGAGCCCAGTGGGGCTCATGTCCCATTCCAGGTTCCAGCATGCCTTGCCTCTGCTTGCTCGGGCTGCCTACGCACTAGCTACATACACCTCTAGCTTCATGTTTCATGTTGGAGTGTGGGGAGAAAACTGGGTTCTTAGCATTAGAGAGGGAAGTGGCAGGTGGCAGATACAAGCTTAGCTCTGACCTGGGTGCACCTCAGCTCTGTGTCCTTTTTTTTCCCTGACCTGAAGCTGACCCCAGCAGAAGTCCCCCAGCCAACCCCTCCACCCAACAACCCCCCACCCTCCCATCCTGCCCCCAGCCATAGTGGGAGCTGGGAGGATTGCAGCATCTAGTGCCTTCCAAGGCTGTTCCTGGAGCGCTGCTTGTAAACCCAAGCCAAGCTTTGTCCCACGTAGGGAGAATGGAAGGTGACTGCAATGTCCCTGTGCCTTTGGCTCCATCTCCCCATTCTGTGGTTCTTTGGGGGTTCCTGCTTCCCTCAAACTGAACACTCTCCTGTCCAACAGCCTGATGGCTTAATTATTGCCTGGAATTGCCCGGCCTCCGATGCTGGAATCAAAGATTGCCTTCCGAAGTATTTTTGTTAAGATGGCAATAAAAAGAAATCAATCTCACTCTTTGAACACACCCAGTGTCCAGGATCTTTCTTTGGTGTGTATTCTCTTTCTTCGTTTCCTGTGAAAACCTCGAGGACCCCAAAGCAGGGGTTAGATGTTTAAGGAAAAGCAGGTTGGTGAGAAGGGCTCAAGTGCCCCTTGATTTCCCTGATTCTATAAACTGCCAGATTCCCTGTATCCAGCACCATGCCAGGCCCTCGGAGGAAAGGAAGGGCATGCATGCACGAAACCACTCAGTTATATTTCATTTCTCTGCTCAAAAGTGAGGTGTTGCTAAGTCAATTTTACCTTTTGTTCCCTAAAAGTAAGCGAGAAGTTCTGGAAAAACAATCACCGTTTCGGACAGGAGGCTTTAGAAGGGTCAGGGGCTGTCCATGTGCCAGTGCACTTTAGGGGCCACCTGGAGGCATGACCCTCCCCACCAATCCAGGTGTCTGTGTGTCTGGCACTGGCAAGGCTCTGCCCACCTAGATCTGAGGCTTCTCAAAGTAACCAAAGCTGCCTCCTCTGCCAAGAGGAAGCCTCCTCACCTGTGCATTGCCCTGGCTTAATACCAGTCTCAGAGAGCTTCTCTCAGGCAGGAAATCCCCTAGTCTTGCCCACAGATCCCCTTTCTAGAAGGTTCTAACTTGCCATCCTCCACAGTTCTTGGCCAAAAAGCATGGCCATAGAAATGGAGGACTACCCAATTTCCGAGAGATGCAAAGATGTCGTGAAACCATTCCCAGGGCCTTCTCTCCCAAGGTCAATGTATGAAGCAGTGACTGGCTGGCTGCTCTCTCTCTTCCTGGGGAGGGAAGGAGCCAAATTGGAAGCTGTAAAACTGAAATGGAAGTCAGAGCAAAAGGGACAGTGAGGACTTGTCAACTTGGGATGGAAAAGATTTTCAGTTTCTGTTTCTTGGCTTCAGTGGGGATTGTTGGGCTAGCACATTAAAACAGGAAGAGGAAACTTGGGTGAGAGACAGAAATGAATTGGAAGAGGGAGGCCTCTAGCCATGACCAGGTGACCATCTGGTGGGTGGATGTGTGACCCAAAGCCCCTCCTAGCCCGGAGACCTATGCATGTGAGAACACAGAGCCCAGCCTCTTCTCAGTCGGTCTTTTCCTAGTTCTGCCTCCTTAACTGGGGCAGCTTCCTTTGTATTGAAGATACCCACTATGCAATAGTGTCTGAGCCTGGCCTAGTCAATTCCCTCCAGCAAAATGGATGCCCTGTGTTATGTTTTCTTTGCGTTAGAAACAATAGTCATGTGCTGACCCAGCTAGAAAATATGATGCACTTGATAAGACACAGTGGGTGAGGTCTGAGAATTGTTGTCTTAGTACTTACCTATCCAGTCCCCAAGGTCAGCTGGGAGGTTGGAATAAAAACAATCCAGGATCATCATGACAGGTTTAGTCCAGAGCTCTCCACCGCCATCAGCAGCACCACCACCTTCCCCTTGATTGCTCCAAAGGTCCCAAATTCTGTGGGTTGGAGTTGAAATGCCTCAATAAGCACTAGCATTTGCAGAACAGTCTCAGCCAGGCATTCTCTGTGCCTTCTCTCAAGAGGTAGTGACCTGGTAACTCTTCAAACCTCCTTGCAAAGAGCTGCTCAGCCACAGTGGATAGATTTTGCCCCTCCTGGTAGCCTTCCACTCCTTGGGGAGGGCTTCTGATTTCTGCAGCCATGTAATGAATGGAACAGGCACAGTTCTTCATAAAGGGGTTGTTGTGAATGGGGACAGAAGGGTTCTGGGGGGTGGTCGAGCCAGCAGGTGTTAAGGCAAAACACTTAAAAGCAGGAGATCTAATCAGAGGTAACAGGTCTGGGGACCTAGCTGGCTTCATTTAGCTTTACCTCTTAAATGGTATAACATAAACATCTTGTCAGGGGAATGGGTTGTGATTCACCAAGAGTTGCCATATACATTGTATTTCAAATGCTAAGTTTCAGAACAACAAATACAACAAAATCTGAATAAGCATTGATCTGCCTTTGAAAATACTTTGTGATTTATACAACGCCTTGAGGTTAGCTTTCCAAATATTGATTCTTGATGGATAGAAAAAGACCAGAAGATGGAAAGTTAAATTGACTTGAGTCTTTCTAAACCTTTTGACACACCCTAGAAGTTGCTCTTTTGAATAAATAAATCCCAGATAGGAATGTATTTCTCATCTAGCTTTTTCTCTTGATGTCAAGTGTCAGAGAAATAATTCTAGCTTTTAGAGGTTGGTGGTTGTTTAGAAACTGGAAGAAAAAAAGGAGAAGACAGTATTCTCCAATCATAGTGCTATGATTCAAGTGAGTCTTGTGAGAAAAAAGACGAATGAATGGTTTCCCTTTTGTATCTGGGAGCAGGAAAGTTTGGAACAACTTCTATTCTGTGCTAACCGCAAGGTTGATTATTTTTGGATGTCAAATCCTAGACTCTCACTAAATTGGGGACTGGAAATATTTTGCATATTCAGAAGAAATCTCAGCTATGGAGAAAAGACTGACTCACAGTTGTAGAATTGAGATTGGGAATTATTAATTTGGAGTGACTTCTCTCACTCCAAATTAAAGGAAAAGGGGCTCTTTTCCTTTCTCTTAAGTCCTTTGTTAATAACATCCTGGCTGGGTGCGTGGAAATCACCCTGTGGTCTTCACTACTCAGGGATAGCGATGCTTATATCCGATGTGATAAGAACACCGATGTGTTGGGGCTAACAGAGAACACAGACCTAGGACAAGATGCAAATTCTGGCGGATCTAAGCACCGTAAATCTTGCAAGTTCTACACCTCCATGGTGGAGCCTGTGGCTTGCTTCTCTCAAAAGGTTGAAGCAGCCAAAGCCAGCATTTGCTCTCCCATCTGCCTTGGTCTTACTCCTTCTGAGGTCTTGCAGCATCCTGTTGCCAGAATGGATTGTTCCCTGGACTCCAGTGATCCTCCTTGGAAGGCAACAGCCTCCTCCCAGGCTCTCCAGATGAGCAAGGCAGGATATAGATGAGGGGCAGCTGGTGCCATCCCTGGGACCTCTAGAATGTAGATTCTCCATGCTGCTAGCTGCCACCACTGTCACCTCATACTGGAATTGGCATTCGTATATTTCTTTTCTTTATATGTGTGTCAGGAGTGAGGTGCGTGACAGTAATAGTTGCTTATTGAGGGAAACTTTGAAAGTATGCAAAATTACAAAGATGATCCACCTGTAAGGGGTTGTCACTGTTAAAACATTGGTATATTTCCTTCAAGTCGTTTACTGGGGCTTGTTTTTAAAGCATTATTGGAACCATAGTCTACTTCCAGTCCTATTGTTCTCACACTATCTTATTTCAACACCATTTTTCCATGTCATAAAAGATTCTTTGAAAACATTTTTCTATAGATGAATAGCATTCCATTATATAAATGTAACATCATTTACGAAATCTTATCTAGTATTAGACATTTAAATGTTTTGCCTTTGTACTGCTATACACAATGATACAAGTCAGCATATTGGTATGCCGGGTTTGCATACTTCATCCATAACTTATGTTTCTTGAGCCATATTGCCAAATTGTTTCCTAAAGGGTTGCACCTGTTAATTCTGCATCATCAGTACAGGAGACACCTTTCTTACCACCTTTACCAATAGAGATATTATCATCTTTTAGAAATCTGTGCCAATGAGACAATGTACTACGCTGTGTTTCTGTTATTAGTGATGCTGAATACTTTTCATTTGTTTATTATCCATCTGAATTCTTCTGTGAATTTTTGTTTCCCCTGGACTTTTCCAGATATAATTCATTGGGCTACACCAATCAGACAGACTTTGATTTTTGTCCCTTGTTTTTGAGACAAACCATAACATAAAGAAGTTTATTTTTTACTACAAATTTCCTAGGTGCTTGTGTAGCTCAGAACCCTAAAACGTCAACTAATTTCCTCTTGCCCTCTGATCTGTACACCTTCACTCCTCGGCAGGTGTTCCCTCATCCCACCTTTTGGAGGTGGGTAGGGTGGTGGGCTGGATGTCGCACATGTTGTTTCAGTGAGAATGGGCGAGGGCCATAGATTCTGAGGGTTTGACAGAACTTTAAAGGTTTTCTGGGCATTGCCGAGTTGGTGCTTTACATGCCCACATAGGAGCCATGAGTTACAGTGGGAAACGTGCATAGGACTCAAAGCTCCATCTCCCATTTATTAGCTGTGTGACTTTGGGCAAGTTGCTTGGCCTCTCTGAGCCTCAGTCTCCTTACCTTAAAATCATTTAGTAAGATTAACCAGTGGTTGTCAACCTTTTGTAGTCTGTTATTTACCTTCCTCCCCTGTCCCCACTGGAGCCCCCATTTTTTAAAAGATTTTGATCTTTAGCATTTATTAATTGATCTCTTGGACACCTTGTCACAGGGGCTATTTCAGCAAGGCTTTGTGAAATACTGGAAACAGTTGAAGGACCCCAGCCTTACCACCTTCAGAGGCCTGTGGGTATCTGGGAACCCCAGTGGTTAAAAGTTAGTGAAGAGTAGAAGAGATAACCTTTCAGTTTTTCAATCACTTATAATATTTAGTTGATATATTTTCCATATGGTGTGAGGCAGGCAGGGCAGGTGTCATATCCAGTCTCAGAAAACAGAGATTCTTAGAGGTTTGGAGATCTGCTTGAGGTCCCACAACACGGTGACGTTGGGACAGGGATGGGTTCTGGCTGGTGCTGCTTCTCCGGACAGGGCAGCTGCTCTGCTGATGTTCACATGGGCCCACGTGCCTGTGGACTTCTAACCATCCACACTTGCCCAGCACTGTGCCGGCACCAGCGGGCACTCAACAAAGGGTGGCCCGTGCGTTCTCACCTGTCTCCCCTCCCCACCAG
Seq C2 exon
GTACGTGGTCATCTCCCGGGAGGAGAGGGAGCAGAACCTGCTGGCGTTCCAGCACAGTGAGCGCATCTACTTCCGGGCGTGCAGGGACATCCGGCCTGGGGAGTGGCTGCGGGTCTGGTACAGCGAGGACTACATGAAGCGCCTGCACAGCATGTCCCAGGAAACCATTCACCGCAACCTGGCCAGAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000019485:ENST00000530656:5
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.128 A=NA C2=0.094
Domain overlap (PFAM):
C1:
NO
A:
NA
C2:
NO
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Other assemblies
Conservation
Cow
(bosTau6)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains
- Pre-implantation embryo development