Special

ENSBTAG00000020772 @ bosTau6

Biotype
protein_coding
Gene Symbol
HMHA1
Description
histocompatibility (minor) HA-1 [Source:HGNC Symbol;Acc:HGNC:17102]
Coordinates
chr7:45182657-45191973:+
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Intron Retention
278
chr7:45188967-45189244
+
31.91
38.43
0
Intron Retention
235
chr7:45185086-45185320
+
77.75
8.66
0
Intron Retention
160
chr7:45185392-45185551
+
70.71
39.92
0
Intron Retention
423
chr7:45186433-45186855
+
64.84
16.1
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000180448 ARHGAP45 1-to-1
Human hg19 ENSG00000180448 HMHA1 1-to-1
Mouse mm10 ENSMUSG00000035697 Arhgap45 1-to-1
Mouse mm9 ENSMUSG00000035697 Hmha1 1-to-1
Rat rn6 ENSRNOG00000013220 Arhgap45 1-to-1
Chicken galGal4 ENSGALG00000002559 HMHA1 1-to-1
Chicken galGal3 ENSGALG00000002559 HMHA1 1-to-1
Zebrafish danRer10 ENSDARG00000052496 HMHA1 (1 of 2) 1-to-3
Zebrafish danRer10 ENSDARG00000062049 hmha1b 1-to-3
Zebrafish danRer10 ENSDARG00000095174 si:ch73-243b8.4 1-to-3