Special

ENSG00000180448 @ hg19

Biotype
protein_coding
Gene Symbol
HMHA1
Description
histocompatibility (minor) HA-1 [Source:HGNC Symbol;Acc:17102]
Coordinates
chr19:1066025-1086627:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Intron Retention
2977
chr19:1074879-1077855
+
13.48
26.75
0
Intron Retention
76
chr19:1083066-1083141
+
8.6
50.33
0
Intron Retention
1313
chr19:1084346-1085658
+
11.82
23.83
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000035697 Arhgap45 1-to-1
Mouse mm9 ENSMUSG00000035697 Hmha1 1-to-1
Rat rn6 ENSRNOG00000013220 Arhgap45 1-to-1
Cow bosTau6 ENSBTAG00000020772 HMHA1 1-to-1
Chicken galGal4 ENSGALG00000002559 HMHA1 1-to-1
Chicken galGal3 ENSGALG00000002559 HMHA1 1-to-1
Zebrafish danRer10 ENSDARG00000052496 HMHA1 (1 of 2) 1-to-3
Zebrafish danRer10 ENSDARG00000062049 hmha1b 1-to-3
Zebrafish danRer10 ENSDARG00000095174 si:ch73-243b8.4 1-to-3