Special

ENSGALG00000002559 @ galGal4

Biotype
protein_coding
Gene Symbol
HMHA1
Description
minor histocompatibility protein HA-1 [Source:RefSeq peptide;Acc:NP_001026108]
Coordinates
chr28:2841255-2853585:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]



EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
21.92
34.27
0
Alternative 3'ss
3
chr28:2848056-2848058
+
78.08
34.27
0
Alternative 3'ss
0
NA
+
66.6
48.55
0
Alternative 3'ss
3
chr28:2848534-2848536
+
32.99
48.42
0
Exon Skipping
102
chr28:2848537-2848638
+
96.58
33.87
0
Intron Retention
219
chr28:2847567-2847785
+
12.01
40.91
0
Intron Retention
124
chr28:2847935-2848058
+
24.69
44.17
0
Intron Retention
1003
chr28:2842893-2843895
+
6.37
38.94
0
Intron Retention
116
chr28:2844897-2845012
+
6.93
25.71
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000180448 ARHGAP45 1-to-1
Human hg19 ENSG00000180448 HMHA1 1-to-1
Mouse mm10 ENSMUSG00000035697 Arhgap45 1-to-1
Mouse mm9 ENSMUSG00000035697 Hmha1 1-to-1
Cow bosTau6 ENSBTAG00000020772 HMHA1 1-to-1
Zebrafish danRer10 ENSDARG00000052496 HMHA1 (1 of 2) 1-to-2
Zebrafish danRer10 ENSDARG00000062049 hmha1b 1-to-2