Special

ENSMUSG00000035697 @ mm9

Biotype
protein_coding
Gene Symbol
Hmha1
Description
histocompatibility (minor) HA-1 [Source:MGI Symbol;Acc:MGI:1917969]
Coordinates
chr10:79479398-79494217:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Intron Retention
891
chr10:79482544-79483434
+
51.16
99.67
0
Intron Retention
557
chr10:79487597-79488153
+
29.19
59.34
0
Intron Retention
194
chr10:79483940-79484133
+
27.18
53.26
0
Intron Retention
90
chr10:79484201-79484290
+
16.39
41.61
0
Intron Retention
111
chr10:79484429-79484539
+
12.27
33.33
0
Intron Retention
2307
chr10:79485101-79487407
+
8.67
28.4
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000180448 ARHGAP45 1-to-1
Human hg19 ENSG00000180448 HMHA1 1-to-1
Rat rn6 ENSRNOG00000013220 Arhgap45 1-to-1
Cow bosTau6 ENSBTAG00000020772 HMHA1 1-to-1
Chicken galGal4 ENSGALG00000002559 HMHA1 1-to-1
Chicken galGal3 ENSGALG00000002559 HMHA1 1-to-1
Zebrafish danRer10 ENSDARG00000052496 HMHA1 (1 of 2) 1-to-3
Zebrafish danRer10 ENSDARG00000062049 hmha1b 1-to-3
Zebrafish danRer10 ENSDARG00000095174 si:ch73-243b8.4 1-to-3