Special

ENSG00000049323 @ hg38

Biotype
protein_coding
Gene Symbol
LTBP1
Description
latent transforming growth factor beta binding protein 1 [Source:HGNC Symbol;Acc:HGNC:6714]
Coordinates
chr2:32946972-33399509:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
48.95
63.64
0
Alternative 3'ss
159
chr2:33257284-33257442
+
49.08
62.93
0
Alternative 3'ss
0
NA
+
12.16
71.35
0
Alternative 3'ss
3
chr2:33263294-33263296
+
87.84
71.35
0
Alternative 3'ss
6
chr2:33363390-33363395
+
95.98
100
0
Alternative 3'ss
437
chr2:33362959-33363395
+
1.64
72.53
0
Alternative 3'ss
57
chr2:33364216-33364272
+
71.18
99.49
0
Alternative 3'ss
80
chr2:33364193-33364272
+
28.52
99.36
0
Alternative 3'ss
0
NA
+
5.36
76.41
0
Alternative 3'ss
9
chr2:33365333-33365341
+
94.64
76.41
0
Alternative 5'ss
0
NA
+
94.71
100
0
Alternative 5'ss
3
chr2:33262822-33262824
+
5.29
100
0
Exon Skipping
48
chr2:33184801-33184848
+
2.09
42.42
0
Exon Skipping
168
chr2:33134793-33134960
+
91.76
26.92
0
Exon Skipping
120
chr2:33280039-33280158
+
96.87
50.34
0
Exon Skipping
126
chr2:33342838-33342963
+
74.35
82.76
0
Exon Skipping
69
chr2:33257443-33257511
+
96.69
83.75
0
Exon Skipping
126
chr2:33273656-33273781
+
93.2
100
0
Exon Skipping
85
chr2:33351590-33351674
+
0.95
25.37
0
Exon Skipping
84
chr2:33364273-33364356
+
41.37
61.98
0
Exon Skipping
103
chr2:33217552-33217654
+
98.56
43.16
0
Exon Skipping
275
chr2:33188577-33188851
+
97.21
76.05
0
Exon Skipping
225
chr2:33186856-33187080
+
91.39
81.01
0
Exon Skipping
298
chr2:33020909-33021206
+
76.58
100
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000001870 Ltbp1 1-to-1
Mouse mm9 ENSMUSG00000001870 Ltbp1 1-to-1
Rat rn6 ENSRNOG00000033090 Ltbp1 1-to-1
Cow bosTau6 ENSBTAG00000019839 LTBP1 1-to-1
Chicken galGal4 ENSGALG00000010448 LTBP1 1-to-1
Chicken galGal3 ENSGALG00000010448 LTBP1 1-to-1
Zebrafish danRer10 ENSDARG00000056922 ltbp1 1-to-2
Zebrafish danRer10 ENSDARG00000097768 ltbp1 1-to-2
Fruitfly dm6 FBgn0053196 dp 4-to-1