Special

ENSG00000079337 @ hg38

Biotype
protein_coding
Gene Symbol
RAPGEF3
Description
Rap guanine nucleotide exchange factor 3 [Source:HGNC Symbol;Acc:HGNC:16629]
Coordinates
chr12:47734367-47771040:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
-
16.79
47.53
0
Alternative 3'ss
23
chr12:47751194-47751216
-
82.2
47.53
0
Exon Skipping
48
chr12:47739371-47739418
-
9.2
26.76
0
Exon Skipping
182
chr12:47740642-47740823
-
96.22
30.88
0
Exon Skipping
79
chr12:47748074-47748152
-
95.87
62.26
0
Intron Retention
458
chr12:47748932-47749389
-
29.61
87.37
0
Intron Retention
2791
chr12:47744069-47746859
-
50.78
81.06
0
Intron Retention
310
chr12:47743677-47743986
-
16.43
79.25
0
Intron Retention
1927
chr12:47741603-47743529
-
13.88
55.66
0
Intron Retention
91
chr12:47740824-47740914
-
5.7
92.46
0
Intron Retention
113
chr12:47740192-47740304
-
4.64
93.62
0
Intron Retention
910
chr12:47739231-47740140
-
11.05
43.67
0
Intron Retention
350
chr12:47749991-47750340
-
10.33
28.57
0
Intron Retention
112
chr12:47749818-47749929
-
12.98
31.58
0
Intron Retention
472
chr12:47758079-47758550
-
11.64
28.57
0
Intron Retention
276
chr12:47748543-47748818
-
30.85
55.8
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000022469 Rapgef3 1-to-1
Mouse mm9 ENSMUSG00000022469 Rapgef3 1-to-1
Rat rn6 ENSRNOG00000059961 Rapgef3 1-to-1
Cow bosTau6 ENSBTAG00000006828 RAPGEF3 1-to-1
Chicken galGal4 ENSGALG00000006348 RAPGEF3 1-to-1
Chicken galGal3 ENSGALG00000006348 RAPGEF3 1-to-1
Zebrafish danRer10 ENSDARG00000079291 rapgef3 1-to-1
Fruitfly dm6 FBgn0085421 Epac 4-to-1