Special

ENSG00000081052 @ hg19

Biotype
protein_coding
Gene Symbol
COL4A4
Description
collagen, type IV, alpha 4 [Source:HGNC Symbol;Acc:2206]
Coordinates
chr2:227867427-228029266:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
108
chr2:227924852-227924959
-
87.33
28.57
0
Exon Skipping
184
chr2:227942610-227942793
-
90.88
30.19
0
Exon Skipping
43
chr2:228009232-228009274
-
98.01
25.23
0
Exon Skipping
189
chr2:227875029-227875217
-
89.74
24.68
0
Intron Retention
4528
chr2:227968769-227973296
-
9.01
29.96
0
Intron Retention
295
chr2:227967565-227967859
-
10.55
42.87
0
Intron Retention
879
chr2:227966626-227967504
-
12.31
46.46
0
Intron Retention
845
chr2:227914848-227915692
-
6.89
29.07
0
Intron Retention
4290
chr2:227907901-227912190
-
4.8
25.62
0
Intron Retention
9750
chr2:227877014-227886763
-
8.53
29.3
0
Intron Retention
1679
chr2:227875218-227876896
-
12.87
42.21
0
Intron Retention
2008
chr2:227873021-227875028
-
36.65
53.77
0
Intron Retention
429
chr2:227872305-227872733
-
27.27
44.07
0
Intron Retention
2391
chr2:227974003-227976393
-
6.68
22.65
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000067158 Col4a4 1-to-1
Mouse mm9 ENSMUSG00000067158 Col4a4 1-to-1
Cow bosTau6 ENSBTAG00000021310 COL4A4 1-to-1
Chicken galGal4 ENSGALG00000004946 COL4A4 1-to-1
Zebrafish danRer10 ENSDARG00000052061 col4a6 3-to-1
Fruitfly dm6 FBgn0000299 Cg25C 17-to-2
Fruitfly dm6 FBgn0016075 vkg 17-to-2