Special

ENSG00000081052 @ hg38

Biotype
protein_coding
Gene Symbol
COL4A4
Description
collagen type IV alpha 4 chain [Source:HGNC Symbol;Acc:HGNC:2206]
Coordinates
chr2:227002711-227164113:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
108
chr2:227060136-227060243
-
87.72
28.57
0
Exon Skipping
184
chr2:227077894-227078077
-
90.71
30.19
0
Exon Skipping
43
chr2:227144516-227144558
-
95.02
100
0
Exon Skipping
189
chr2:227010313-227010501
-
89.56
24.68
0
Exon Skipping
98
chr2:227087966-227088063
-
4.65
13.51
0
Exon Skipping
183
chr2:227085972-227086154
-
5.3
14.87
0
Exon Skipping
181
chr2:227144653-227144833
-
3.33
25
0
Intron Retention
4528
chr2:227104053-227108580
-
7.86
29.41
0
Intron Retention
295
chr2:227102849-227103143
-
10.22
42.87
0
Intron Retention
879
chr2:227101910-227102788
-
12.53
46.46
0
Intron Retention
845
chr2:227050132-227050976
-
7.08
29.07
0
Intron Retention
4290
chr2:227043185-227047474
-
4.77
25.62
0
Intron Retention
9750
chr2:227012298-227022047
-
8.51
26.4
0
Intron Retention
1679
chr2:227010502-227012180
-
12.86
42.21
0
Intron Retention
2008
chr2:227008305-227010312
-
40.11
90.61
0
Intron Retention
429
chr2:227007589-227008017
-
26.8
44.07
0
Intron Retention
2391
chr2:227109287-227111677
-
5.3
22.44
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000067158 Col4a4 1-to-1
Mouse mm9 ENSMUSG00000067158 Col4a4 1-to-1
Cow bosTau6 ENSBTAG00000021310 COL4A4 1-to-1
Chicken galGal4 ENSGALG00000004946 COL4A4 1-to-1
Chicken galGal3 ENSGALG00000004946 COL4A4 1-to-1
Zebrafish danRer10 ENSDARG00000002831 col4a4 1-to-1
Fruitfly dm6 FBgn0000299 Cg25C 17-to-2
Fruitfly dm6 FBgn0016075 vkg 17-to-2