Special

ENSG00000082293 @ hg38

Biotype
protein_coding
Gene Symbol
COL19A1
Description
collagen type XIX alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2196]
Coordinates
chr6:69866571-70209976:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
126
chr6:69936785-69936910
+
75.04
63.08
0
Exon Skipping
54
chr6:70023627-70023680
+
89.97
24.31
0
Exon Skipping
42
chr6:70130182-70130223
+
77.37
50
0
Exon Skipping
53
chr6:69937126-69937178
+
3.85
100
0
Intron Retention
33692
chr6:70068477-70102168
+
11.61
29.74
0
Intron Retention
19657
chr6:70102223-70121879
+
5.58
28.19
0
Intron Retention
3206
chr6:70137748-70140953
+
15.43
24
0
Intron Retention
1389
chr6:70142821-70144209
+
26.57
42.96
0
Intron Retention
654
chr6:70144264-70144917
+
17.85
60.95
0
Intron Retention
1651
chr6:70145008-70146658
+
9.4
24.86
0
Intron Retention
2544
chr6:70163397-70165940
+
17.29
6.99
0
Intron Retention
2039
chr6:70165986-70168024
+
29.27
60.76
0
Intron Retention
3282
chr6:70168682-70171963
+
11.88
16.32
0
Intron Retention
4179
chr6:70180524-70184702
+
7.87
20.45
0
Intron Retention
3921
chr6:69932864-69936784
+
10.92
19.24
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000026141 Col19a1 1-to-1
Mouse mm9 ENSMUSG00000026141 Col19a1 1-to-1
Rat rn6 ENSRNOG00000012759 Col19a1 1-to-1
Chicken galGal4 ENSGALG00000016155 COL19A1 1-to-1
Chicken galGal3 ENSGALG00000016155 COL19A1 1-to-1
Fruitfly dm6 FBgn0259244 CG42342 8-to-1