Special

ENSG00000091409 @ hg19

Biotype
protein_coding
Gene Symbol
ITGA6
Description
integrin, alpha 6 [Source:HGNC Symbol;Acc:6142]
Coordinates
chr2:173292082-173371181:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
80
chr2:173332209-173332288
+
97.32
55.84
0
Exon Skipping
117
chr2:173337502-173337618
+
0.73
18.75
1
Exon Skipping
130
chr2:173366500-173366629
+
51.44
98.16
11
Intron Retention
1365
chr2:173354387-173355751
+
8.09
51.18
0
Intron Retention
98
chr2:173355851-173355948
+
3.49
100
0
Intron Retention
93
chr2:173356060-173356152
+
6.14
100
0
Intron Retention
1564
chr2:173332289-173333852
+
5.4
77.88
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000027111 Itga6 1-to-1
Mouse mm9 ENSMUSG00000027111 Itga6 1-to-1
Rat rn6 ENSRNOG00000001518 Itga6 1-to-1
Cow bosTau6 ENSBTAG00000017266 ITGA6 1-to-1
Chicken galGal4 ENSGALG00000009362 ITGA6 3-to-1
Chicken galGal3 ENSGALG00000009362 ITA6_CHICK 3-to-1
Zebrafish danRer10 ENSDARG00000042282 itga6a 2-to-3
Zebrafish danRer10 ENSDARG00000056018 itga6l 2-to-3
Zebrafish danRer10 ENSDARG00000069946 itga6b 2-to-3
Fruitfly dm6 FBgn0004456 mew 3-to-1