Special

ENSG00000091428 @ hg38

Biotype
protein_coding
Gene Symbol
RAPGEF4
Description
Rap guanine nucleotide exchange factor 4 [Source:HGNC Symbol;Acc:HGNC:16626]
Coordinates
chr2:172735274-173052893:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
+
73.21
67.5
0
Alternative 5'ss
122
chr2:172928225-172928346
+
26.79
67.5
0
Exon Skipping
89
chr2:172797525-172797613
+
98.19
27.59
0
Exon Skipping
54
chr2:172960760-172960813
+
88.69
67.33
1
Intron Retention
2702
chr2:172985494-172988195
+
17.61
76.19
0
Intron Retention
1151
chr2:173017505-173018655
+
13.47
47.57
0
Intron Retention
1815
chr2:173018803-173020617
+
11.93
38.05
0
Intron Retention
1577
chr2:172965684-172967260
+
10.1
42.17
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000049044 Rapgef4 1-to-1
Mouse mm9 ENSMUSG00000049044 Rapgef4 1-to-1
Rat rn6 ENSRNOG00000001516 Rapgef4 1-to-1
Cow bosTau6 ENSBTAG00000020984 RAPGEF4 1-to-1
Zebrafish danRer10 ENSDARG00000075924 RAPGEF4 (1 of 2) 1-to-2
Zebrafish danRer10 ENSDARG00000079872 rapgef4 1-to-2
Fruitfly dm6 FBgn0085421 Epac 4-to-1