Special

ENSG00000092421 @ hg19

Biotype
protein_coding
Gene Symbol
SEMA6A
Description
sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A [Source:HGNC Symbol;Acc:10738]
Coordinates
chr5:115779312-115910630:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
51
chr5:115808581-115808631
-
6.81
68.17
0
Exon Skipping
165
chr5:115803279-115803443
-
89.72
60.21
0
Intron Retention
4173
chr5:115818272-115822444
-
9.29
40.41
0
Intron Retention
387
chr5:115813851-115814237
-
5.47
40.98
0
Intron Retention
87
chr5:115813623-115813709
-
4.78
100
0
Intron Retention
2242
chr5:115811300-115813541
-
6.55
100
0
Intron Retention
5325
chr5:115803444-115808768
-
16.09
40.45
0
Intron Retention
736
chr5:115831211-115831946
-
13.76
63.93
0
Intron Retention
3582
chr5:115827527-115831108
-
10.17
61.76
0
Intron Retention
2732
chr5:115824704-115827435
-
6.67
100
0
Intron Retention
691
chr5:115823893-115824583
-
11.67
100
0
Intron Retention
1141
chr5:115822663-115823803
-
6.66
51.74
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000019647 Sema6a 1-to-1
Mouse mm9 ENSMUSG00000019647 Sema6a 1-to-1
Rat rn6 ENSRNOG00000004033 Sema6a 1-to-1
Cow bosTau6 ENSBTAG00000020489 SEMA6A 1-to-1
Chicken galGal4 ENSGALG00000002294 SEMA6A 1-to-1
Chicken galGal3 ENSGALG00000002294 SEMA6A 1-to-1
Zebrafish danRer10 ENSDARG00000102165 CABZ01112804.2 1-to-1
Fruitfly dm6 FBgn0011259 Sema-1a 4-to-2
Fruitfly dm6 FBgn0016059 Sema-1b 4-to-2