Special

ENSG00000092421 @ hg38

Biotype
protein_coding
Gene Symbol
SEMA6A
Description
semaphorin 6A [Source:HGNC Symbol;Acc:HGNC:10738]
Coordinates
chr5:116443616-116574934:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
132
chr5:116482444-116482575
-
99.31
25.53
0
Exon Skipping
51
chr5:116472885-116472935
-
7.02
74.11
0
Exon Skipping
165
chr5:116467583-116467747
-
89.46
59.95
0
Intron Retention
4173
chr5:116482576-116486748
-
9.04
40.41
0
Intron Retention
87
chr5:116477927-116478013
-
5.55
100
0
Intron Retention
2242
chr5:116475604-116477845
-
6.74
100
0
Intron Retention
5325
chr5:116467748-116473072
-
17.81
46.72
0
Intron Retention
2517
chr5:116502328-116504844
-
5.2
47.02
0
Intron Retention
736
chr5:116495515-116496250
-
12.28
76.27
0
Intron Retention
3582
chr5:116491831-116495412
-
10.28
57.25
0
Intron Retention
2732
chr5:116489008-116491739
-
6.69
100
0
Intron Retention
691
chr5:116488197-116488887
-
10.48
100
0
Intron Retention
1141
chr5:116486967-116488107
-
6.45
51.74
0
Intron Retention
1013
chr5:116496314-116497326
-
7.62
43.16
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000019647 Sema6a 1-to-1
Mouse mm9 ENSMUSG00000019647 Sema6a 1-to-1
Rat rn6 ENSRNOG00000004033 Sema6a 1-to-1
Cow bosTau6 ENSBTAG00000020489 SEMA6A 1-to-1
Chicken galGal4 ENSGALG00000002294 SEMA6A 1-to-1
Chicken galGal3 ENSGALG00000002294 SEMA6A 1-to-1
Fruitfly dm6 FBgn0011259 Sema-1a 4-to-2
Fruitfly dm6 FBgn0016059 Sema-1b 4-to-2