ENSG00000101204 @ hg19

Biotype

protein_coding

Gene Symbol

CHRNA4

Description

cholinergic receptor, nicotinic, alpha 4 (neuronal) [Source:HGNC Symbol;Acc:1958]

Coordinates

chr20:61974665-62009753:-

Assembly

hg19

Other assemblies

hg38

GENOMIC BROWSER[edit]

EXPRESSION VALUES[edit]

SPECIAL DATASETS

The Cancer Genome Atlas (TCGA)
Genotype-Tissue Expression Project (GTEx)
Autistic and control brains
Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event

Type

Length

Coordinates

Strand

PSI Average

PSI Range

Annotated Functions

HsaALTD0001434-1/2

Alternative 5'ss

0

NA

-

93.24

21.57

0

HsaALTD0001434-2/2

Alternative 5'ss

18

chr20:61987309-61987326

-

6.76

21.57

0

HsaEX0015309

Exon Skipping

100

chr20:61986848-61986947

-

4.42

28.16

0

HsaINT0035187

Intron Retention

1390

chr20:61991052-61992441

-

9.1

53.54

0

HsaINT0035191

Intron Retention

2789

chr20:61978216-61981004

-

7.97

24.1

0

Orthologous genes[edit]

Organism	Assembly	Gene ID	Gene Name	Orthology Type
Mouse	mm10	ENSMUSG00000027577	Chrna4	1-to-1
Mouse	mm9	ENSMUSG00000027577	Chrna4	1-to-1
Rat	rn6	ENSRNOG00000011202	Chrna4	1-to-1
Cow	bosTau6	ENSBTAG00000017198	CHRNA4	1-to-1
Chicken	galGal4	ENSGALG00000005801	CHRNA4	1-to-1
Chicken	galGal3	ENSGALG00000005801	ACHA4_CHICK	1-to-1
Zebrafish	danRer10	ENSDARG00000070724	chrna4b	1-to-1
Fruitfly	dm6	FBgn0000036	nAChRalpha1	9-to-5
Fruitfly	dm6	FBgn0000039	nAChRalpha2	9-to-5
Fruitfly	dm6	FBgn0004118	nAChRbeta2	9-to-5
Fruitfly	dm6	FBgn0015519	nAChRalpha3	9-to-5
Fruitfly	dm6	FBgn0266347	nAChRalpha4	9-to-5