FBgn0000036 @ dm6
Biotype
protein_coding
Gene Symbol
nAChRalpha1
Description
The gene nicotinic Acetylcholine Receptor alpha1 is referred to in FlyBase by the symbol Dmel
AChRalpha1 (CG5610, FBgn0000036). It is a protein_coding_gene from Dmel. It has 4 annotated transcripts and 4 polypeptides (2 unique). Gene sequence location is 3R:24393896..24457157. Its molecular function is described by: neurotransmitter receptor activity; acetylcholine-gated cation-selective channel activity; acetylcholine receptor activity. It is involved in the biological process described with 8 unique terms, many of which group under: cellular process; cell communication; signaling; biological regulation; synaptic signaling. 26 alleles are reported. No phenotypic data is available. The phenotypic classes of alleles include: viable; chemical resistant; some die during pupal stage; memory defective; fertile; lethal - all die before end of pupal stage. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of no expression detected. Peak expression observed within 12-24 hour embryonic stages, during early larval stages.
Coordinates
chr3R:24393896-24457157:-
Assembly
GENOMIC BROWSER[edit]
EXPRESSION VALUES[edit]
SPECIAL DATASETS
- Neural diversity
- Neurogenesis
- Neuronal activity
- Splicing factor regulation (brain)
- Splicing factor regulation (SL2)
EVENTS AND AS PROFILES[edit]
Associated events[edit]
Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Orthologous genes[edit]
| Organism | Assembly | Gene ID | Gene Name | Orthology Type
|
|---|---|---|---|---|
| Human | hg38 | ENSG00000101204 | CHRNA4 | 5-to-9 |
| Human | hg38 | ENSG00000117971 | CHRNB4 | 5-to-9 |
| Human | hg38 | ENSG00000120903 | CHRNA2 | 5-to-9 |
| Human | hg38 | ENSG00000138435 | CHRNA1 | 5-to-9 |
| Human | hg38 | ENSG00000147434 | CHRNA6 | 5-to-9 |
| Human | hg19 | ENSG00000101204 | CHRNA4 | 5-to-9 |
| Human | hg19 | ENSG00000117971 | CHRNB4 | 5-to-9 |
| Human | hg19 | ENSG00000120903 | CHRNA2 | 5-to-9 |
| Human | hg19 | ENSG00000138435 | CHRNA1 | 5-to-9 |
| Human | hg19 | ENSG00000147434 | CHRNA6 | 5-to-9 |
| Mouse | mm10 | ENSMUSG00000022041 | Chrna2 | 5-to-9 |
| Mouse | mm10 | ENSMUSG00000027950 | Chrnb2 | 5-to-9 |
| Mouse | mm10 | ENSMUSG00000031492 | Chrnb3 | 5-to-9 |
| Mouse | mm10 | ENSMUSG00000032303 | Chrna3 | 5-to-9 |
| Mouse | mm10 | ENSMUSG00000035200 | Chrnb4 | 5-to-9 |
| Mouse | mm9 | ENSMUSG00000022041 | Chrna2 | 5-to-9 |
| Mouse | mm9 | ENSMUSG00000027950 | Chrnb2 | 5-to-9 |
| Mouse | mm9 | ENSMUSG00000031492 | Chrnb3 | 5-to-9 |
| Mouse | mm9 | ENSMUSG00000032303 | Chrna3 | 5-to-9 |
| Mouse | mm9 | ENSMUSG00000035200 | Chrnb4 | 5-to-9 |
| Rat | rn6 | ENSRNOG00000012283 | Chrna6 | 5-to-9 |
| Rat | rn6 | ENSRNOG00000013829 | Chrna3 | 5-to-9 |
| Rat | rn6 | ENSRNOG00000017424 | Chrna2 | 5-to-9 |
| Rat | rn6 | ENSRNOG00000018286 | Chrna1 | 5-to-9 |
| Rat | rn6 | ENSRNOG00000020778 | Chrnb2 | 5-to-9 |
| Cow | bosTau6 | ENSBTAG00000002252 | CHRNA2 | 5-to-9 |
| Cow | bosTau6 | ENSBTAG00000013657 | CHRNA5 | 5-to-9 |
| Cow | bosTau6 | ENSBTAG00000014050 | CHRNB3 | 5-to-9 |
| Cow | bosTau6 | ENSBTAG00000014056 | CHRNA6 | 5-to-9 |
| Cow | bosTau6 | ENSBTAG00000018253 | CHRNA1 | 5-to-9 |
| Chicken | galGal4 | ENSGALG00000003005 | CHRNB4 | 5-to-9 |
| Chicken | galGal4 | ENSGALG00000003021 | CHRNA5 | 5-to-9 |
| Chicken | galGal4 | ENSGALG00000005801 | CHRNA4 | 5-to-9 |
| Chicken | galGal4 | ENSGALG00000015384 | CHRNB3 | 5-to-9 |
| Chicken | galGal4 | ENSGALG00000016565 | CHRNA2 | 5-to-9 |
| Chicken | galGal3 | ENSGALG00000003005 | F1NWX4_CHICK | 5-to-9 |
| Chicken | galGal3 | ENSGALG00000003021 | F1NIT6_CHICK | 5-to-9 |
| Chicken | galGal3 | ENSGALG00000005801 | ACHA4_CHICK | 5-to-9 |
| Chicken | galGal3 | ENSGALG00000015384 | F1NA49_CHICK | 5-to-9 |
| Chicken | galGal3 | ENSGALG00000016565 | F1N9F1_CHICK | 5-to-9 |
| Zebrafish | danRer10 | ENSDARG00000003420 | chrna5 | 5-to-14 |
| Zebrafish | danRer10 | ENSDARG00000006602 | chrna2a | 5-to-14 |
| Zebrafish | danRer10 | ENSDARG00000038508 | chrnb3b | 5-to-14 |
| Zebrafish | danRer10 | ENSDARG00000052764 | chrnb3a | 5-to-14 |
| Zebrafish | danRer10 | ENSDARG00000057025 | chrna2b | 5-to-14 |