Special

ENSG00000117971 @ hg19

Biotype
protein_coding
Gene Symbol
CHRNB4
Description
cholinergic receptor, nicotinic, beta 4 (neuronal) [Source:HGNC Symbol;Acc:1964]
Coordinates
chr15:78916461-78933587:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
149
chr15:78927781-78927929
-
89.19
40
0
Exon Skipping
34
chr15:78923270-78923303
-
17.98
28.24
0
Exon Skipping
979
chr15:78921309-78922287
-
97.33
12.12
0
Intron Retention
3675
chr15:78917634-78921308
-
9.29
23.68
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000027950 Chrnb2 2-to-1
Mouse mm9 ENSMUSG00000027950 Chrnb2 2-to-1
Rat rn6 ENSRNOG00000014427 Chrnb4 1-to-1
Cow bosTau6 ENSBTAG00000003132 CHRNB4 1-to-1
Chicken galGal4 ENSGALG00000003005 CHRNB4 1-to-1
Fruitfly dm6 FBgn0000036 nAChRalpha1 9-to-5
Fruitfly dm6 FBgn0000039 nAChRalpha2 9-to-5
Fruitfly dm6 FBgn0004118 nAChRbeta2 9-to-5
Fruitfly dm6 FBgn0015519 nAChRalpha3 9-to-5
Fruitfly dm6 FBgn0266347 nAChRalpha4 9-to-5