Special

ENSG00000117971 @ hg38

Biotype
protein_coding
Gene Symbol
CHRNB4
Description
cholinergic receptor nicotinic beta 4 subunit [Source:HGNC Symbol;Acc:HGNC:1964]
Coordinates
chr15:78624119-78727754:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
149
chr15:78635439-78635587
-
89.47
36.14
0
Exon Skipping
34
chr15:78630928-78630961
-
20.93
36.65
0
Exon Skipping
979
chr15:78628967-78629945
-
97.89
12.41
0
Exon Skipping
94
chr15:78652578-78652671
-
57.88
71.06
0
Exon Skipping
528
chr15:78641079-78641606
-
7
12.13
0
Exon Skipping
90
chr15:78658280-78658369
-
52.41
90.12
0
Exon Skipping
61
chr15:78649379-78649439
-
89.12
26.81
0
Intron Retention
1130
chr15:78629946-78631075
-
12.64
37.08
0
Intron Retention
3675
chr15:78625292-78628966
-
7.78
23.68
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000027950 Chrnb2 2-to-1
Mouse mm9 ENSMUSG00000027950 Chrnb2 2-to-1
Rat rn6 ENSRNOG00000014427 Chrnb4 1-to-1
Cow bosTau6 ENSBTAG00000003132 CHRNB4 1-to-1
Chicken galGal4 ENSGALG00000003005 CHRNB4 1-to-1
Chicken galGal3 ENSGALG00000003005 F1NWX4_CHICK 1-to-1
Zebrafish danRer10 ENSDARG00000101677 chrnb4 1-to-1
Fruitfly dm6 FBgn0000036 nAChRalpha1 9-to-5
Fruitfly dm6 FBgn0000039 nAChRalpha2 9-to-5
Fruitfly dm6 FBgn0004118 nAChRbeta2 9-to-5
Fruitfly dm6 FBgn0015519 nAChRalpha3 9-to-5
Fruitfly dm6 FBgn0266347 nAChRalpha4 9-to-5