Special

ENSG00000147434 @ hg19

Biotype
protein_coding
Gene Symbol
CHRNA6
Description
cholinergic receptor, nicotinic, alpha 6 (neuronal) [Source:HGNC Symbol;Acc:15963]
Coordinates
chr8:42607782-42623619:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
45
chr8:42614212-42614256
-
81.81
21.31
0
Intron Retention
103
chr8:42611968-42612070
-
11.78
29.6
0
Intron Retention
2535
chr8:42608454-42610988
-
20.2
28.61
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000031491 Chrna6 1-to-1
Mouse mm9 ENSMUSG00000031491 Chrna6 1-to-1
Rat rn6 ENSRNOG00000012283 Chrna6 1-to-1
Chicken galGal4 ENSGALG00000015382 CHRNA6 1-to-1
Chicken galGal3 ENSGALG00000015382 F1NKI5_CHICK 1-to-1
Zebrafish danRer10 ENSDARG00000055559 chrna6 1-to-1
Fruitfly dm6 FBgn0000036 nAChRalpha1 9-to-5
Fruitfly dm6 FBgn0000039 nAChRalpha2 9-to-5
Fruitfly dm6 FBgn0004118 nAChRbeta2 9-to-5
Fruitfly dm6 FBgn0015519 nAChRalpha3 9-to-5
Fruitfly dm6 FBgn0266347 nAChRalpha4 9-to-5