Special

ENSG00000120903 @ hg19

Biotype
protein_coding
Gene Symbol
CHRNA2
Description
cholinergic receptor, nicotinic, alpha 2 (neuronal) [Source:HGNC Symbol;Acc:1956]
Coordinates
chr8:27317279-27337400:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
128
chr8:27321378-27321505
-
43.3
26.66
0
Alternative 3'ss
133
chr8:27321378-27321510
-
56.47
26.66
0
Alternative 3'ss
0
NA
-
93.96
31.98
0
Alternative 3'ss
50
chr8:27327499-27327548
-
6.04
31.98
0
Exon Skipping
60
chr8:27332730-27332789
-
6.84
16.58
0
Intron Retention
7629
chr8:27328712-27336340
-
7.49
26.61
0
Intron Retention
381
chr8:27326897-27327277
-
8.31
26.09
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000022041 Chrna2 1-to-1
Mouse mm9 ENSMUSG00000022041 Chrna2 1-to-1
Rat rn6 ENSRNOG00000017424 Chrna2 1-to-1
Cow bosTau6 ENSBTAG00000002252 CHRNA2 1-to-1
Chicken galGal4 ENSGALG00000016565 CHRNA2 1-to-1
Chicken galGal3 ENSGALG00000016565 F1N9F1_CHICK 1-to-1
Zebrafish danRer10 ENSDARG00000006602 chrna2a 1-to-2
Zebrafish danRer10 ENSDARG00000057025 chrna2b 1-to-2
Fruitfly dm6 FBgn0000036 nAChRalpha1 9-to-5
Fruitfly dm6 FBgn0000039 nAChRalpha2 9-to-5
Fruitfly dm6 FBgn0004118 nAChRbeta2 9-to-5
Fruitfly dm6 FBgn0015519 nAChRalpha3 9-to-5
Fruitfly dm6 FBgn0266347 nAChRalpha4 9-to-5