Special

ENSG00000112511 @ hg38

Biotype
protein_coding
Gene Symbol
PHF1
Description
PHD finger protein 1 [Source:HGNC Symbol;Acc:HGNC:8919]
Coordinates
chr6:33410399-33416453:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
41.8
75.56
0
Alternative 3'ss
11
chr6:33414955-33414965
+
58.2
75.56
0
Exon Skipping
50
chr6:33411166-33411215
+
86.46
14.3
0
Exon Skipping
96
chr6:33413736-33413831
+
94.64
52.38
0
Exon Skipping
190
chr6:33414955-33415144
+
92.12
69.95
0
Exon Skipping
95
chr6:33415235-33415329
+
96.36
72.12
0
Intron Retention
136
chr6:33414830-33414965
+
35.59
62.58
0
Intron Retention
445
chr6:33415145-33415589
+
49.58
91.43
0
Intron Retention
139
chr6:33415671-33415809
+
3.12
52.79
0
Intron Retention
108
chr6:33412590-33412697
+
5.71
62.1
0
Intron Retention
402
chr6:33412794-33413195
+
9.12
73.63
0
Intron Retention
112
chr6:33413297-33413408
+
7.2
50.35
0
Intron Retention
178
chr6:33413558-33413735
+
22.79
64.65
0
Intron Retention
209
chr6:33413832-33414040
+
10.78
57.78
0
Intron Retention
133
chr6:33414110-33414242
+
8.5
53.09
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000024193 Phf1 1-to-1
Mouse mm9 ENSMUSG00000024193 Phf1 1-to-1
Rat rn6 ENSRNOG00000000480 Phf1 1-to-1
Cow bosTau6 ENSBTAG00000001634 PHF1 1-to-1
Zebrafish danRer10 ENSDARG00000057439 phf1 1-to-1
Fruitfly dm6 FBgn0003044 Pcl 3-to-1