Special

ENSMUSG00000024193 @ mm10

Biotype
protein_coding
Gene Symbol
Phf1
Description
PHD finger protein 1 [Source:MGI Symbol;Acc:MGI:98647]
Coordinates
chr17:26933127-26937890:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
5
chr17:26936523-26936527
+
44.97
76.14
0
Alternative 3'ss
16
chr17:26936512-26936527
+
54.7
76.14
0
Alternative 3'ss
39
chr17:26937057-26937095
+
4.99
60
0
Alternative 3'ss
42
chr17:26937054-26937095
+
94.81
60
0
Exon Skipping
105
chr17:26936287-26936391
+
97.06
26.36
0
Exon Skipping
169
chr17:26936512-26936680
+
97.12
57.16
0
Intron Retention
95
chr17:26936192-26936286
+
14.82
63.04
0
Intron Retention
120
chr17:26936392-26936511
+
44.71
94.78
0
Intron Retention
85
chr17:26934369-26934453
+
14.24
57.89
0
Intron Retention
327
chr17:26934727-26935053
+
16.24
44.64
0
Intron Retention
100
chr17:26935819-26935918
+
17.15
70.83
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000112511 PHF1 1-to-1
Human hg19 ENSG00000112511 PHF1 1-to-1
Rat rn6 ENSRNOG00000000480 Phf1 1-to-1
Cow bosTau6 ENSBTAG00000001634 PHF1 1-to-1
Zebrafish danRer10 ENSDARG00000057439 phf1 1-to-1
Fruitfly dm6 FBgn0003044 Pcl 3-to-1