Special

ENSG00000114923 @ hg38

Biotype
protein_coding
Gene Symbol
SLC4A3
Description
solute carrier family 4 member 3 [Source:HGNC Symbol;Acc:HGNC:11029]
Coordinates
chr2:219627327-219641980:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
44.19
75.67
0
Alternative 3'ss
60
chr2:219627900-219627959
+
55.81
75.67
0
Alternative 3'ss
3
chr2:219633880-219633882
+
87.76
32.04
0
Alternative 3'ss
0
NA
+
90.48
23.36
0
Alternative 3'ss
81
chr2:219630072-219630152
+
9.52
23.36
0
Alternative 5'ss
0
NA
+
69.12
79.22
0
Alternative 5'ss
196
chr2:219628571-219628766
+
28.01
78.57
0
Exon Skipping
174
chr2:219640789-219640962
+
99.3
25.97
0
Intron Retention
422
chr2:219633458-219633879
+
18.2
43.22
0
Intron Retention
410
chr2:219635892-219636301
+
7.12
27.01
0
Intron Retention
612
chr2:219638870-219639481
+
17.21
37.41
0
Intron Retention
573
chr2:219628571-219629143
+
44.2
86.85
0
Intron Retention
1615
chr2:219630353-219631967
+
8.03
29.7
0
Intron Retention
431
chr2:219632443-219632873
+
22.92
53.26
0
Intron Retention
376
chr2:219629696-219630071
+
24.06
79.65
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000006576 Slc4a3 1-to-1
Mouse mm9 ENSMUSG00000006576 Slc4a3 1-to-1
Rat rn6 ENSRNOG00000020138 Slc4a3 1-to-1
Cow bosTau6 ENSBTAG00000014975 SLC4A3 1-to-1
Chicken galGal4 ENSGALG00000011224 SLC4A3 1-to-1
Chicken galGal3 ENSGALG00000011224 SLC4A3 1-to-1
Zebrafish danRer10 ENSDARG00000104005 SLC4A3 1-to-1
Fruitfly dm6 FBgn0036043 CG8177 3-to-1