Special

ENSG00000121903 @ hg38

Biotype
protein_coding
Gene Symbol
ZSCAN20
Description
zinc finger and SCAN domain containing 20 [Source:HGNC Symbol;Acc:HGNC:13093]
Coordinates
chr1:33472645-33496507:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
26.11
46.16
0
Alternative 3'ss
3
chr1:33493187-33493189
+
73.89
46.16
0
Alternative 5'ss
0
NA
+
25.05
47.5
0
Alternative 5'ss
4
chr1:33472688-33472691
+
72.99
70.37
0
Exon Skipping
527
chr1:33479179-33479705
+
96.78
64.31
0
Exon Skipping
77
chr1:33489115-33489191
+
76.17
70.13
0
Exon Skipping
85
chr1:33489518-33489602
+
75.31
67.29
0
Intron Retention
8759
chr1:33479706-33488464
+
11.72
34.43
0
Intron Retention
326
chr1:33489192-33489517
+
10.12
32
0
Intron Retention
1484
chr1:33491703-33493186
+
14.62
72.51
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000061894 Zscan20 1-to-1
Mouse mm9 ENSMUSG00000061894 Zscan20 1-to-1
Rat rn6 ENSRNOG00000005886 Zscan20 1-to-1
Cow bosTau6 ENSBTAG00000019555 ZSCAN20 1-to-1
Zebrafish danRer10 ENSDARG00000097776 ZSCAN20 4-to-1