Special

ENSG00000124749 @ hg38

Biotype
protein_coding
Gene Symbol
COL21A1
Description
collagen type XXI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:17025]
Coordinates
chr6:56056590-56394094:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
-
16.31
47.37
0
Alternative 5'ss
8
chr6:56156887-56156894
-
83.69
47.37
0
Exon Skipping
74
chr6:56231061-56231134
-
6.77
100
0
Exon Skipping
25
chr6:56108788-56108812
-
10.02
33.14
0
Exon Skipping
36
chr6:56067295-56067330
-
94.85
24.89
0
Exon Skipping
87
chr6:56091497-56091583
-
3.8
92.84
0
Exon Skipping
52
chr6:56225860-56225911
-
5.78
19.85
0
Exon Skipping
54
chr6:56075479-56075532
-
97.81
44.95
0
Intron Retention
14903
chr6:56141984-56156886
-
4.17
25.23
0
Intron Retention
23898
chr6:56077574-56101471
-
6.18
23.38
0
Intron Retention
1715
chr6:56067331-56069045
-
13.34
36.65
0
Intron Retention
611
chr6:56061038-56061648
-
9.76
26.03
0
Intron Retention
522
chr6:56060219-56060740
-
8.45
29.34
0
Intron Retention
7473
chr6:56156950-56164422
-
5.82
33.45
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Cow bosTau6 ENSBTAG00000033515 1-to-1
Chicken galGal4 ENSGALG00000016292 COL21A1 1-to-1
Chicken galGal3 ENSGALG00000016292 COL21A1 1-to-1
Zebrafish danRer10 ENSDARG00000025320 COL21A1 1-to-1
Fruitfly dm6 FBgn0259244 CG42342 8-to-1