Special

ENSG00000130714 @ hg19

Biotype
protein_coding
Gene Symbol
POMT1
Description
protein-O-mannosyltransferase 1 [Source:HGNC Symbol;Acc:9202]
Coordinates
chr9:134378289-134399193:+
Assembly
hg19
Other assemblies
hg38

GENOMIC BROWSER[edit]

EXPRESSION VALUES[edit]

SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
+
93.95
32.35
0
Alternative 5'ss
240
chr9:134378461-134378700
+
6.05
32.35
0
Alternative 5'ss
0
NA
+
87.7
38.72
0
Alternative 5'ss
5
chr9:134386855-134386859
+
12.3
38.72
0
Alternative 5'ss
0
NA
+
89.19
40.82
0
Alternative 5'ss
66
chr9:134385384-134385449
+
10.81
40.82
0
Exon Skipping
152
chr9:134379576-134379727
+
64.72
78.21
0
Exon Skipping
107
chr9:134381501-134381607
+
85.98
68.09
0
Exon Skipping
147
chr9:134382755-134382901
+
95.19
27.31
0
Exon Skipping
112
chr9:134384298-134384409
+
96.31
26.37
0
Exon Skipping
66
chr9:134385130-134385195
+
96.97
29.59
0
Intron Retention
573
chr9:134386855-134387427
+
10.35
31.87
0
Intron Retention
1773
chr9:134379728-134381500
+
21.72
52.51
0
Intron Retention
182
chr9:134381608-134381789
+
12.27
38.42
0
Intron Retention
1396
chr9:134382902-134384297
+
24.43
38.83
0
Intron Retention
720
chr9:134384410-134385129
+
15.94
36.19
0
Intron Retention
197
chr9:134385450-134385646
+
78.04
78.05
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000039254 Pomt1 1-to-1
Mouse mm9 ENSMUSG00000039254 Pomt1 1-to-1
Rat rn6 ENSRNOG00000010477 Pomt1 1-to-1
Cow bosTau6 ENSBTAG00000010805 POMT1 1-to-1
Chicken galGal4 ENSGALG00000003757 POMT1 1-to-1
Chicken galGal3 ENSGALG00000003757 POMT1 1-to-1
Zebrafish danRer10 ENSDARG00000067670 pomt1 1-to-1
Fruitfly dm6 FBgn0003292 rt 1-to-1
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