Special

ENSG00000141338 @ hg38

Biotype
protein_coding
Gene Symbol
ABCA8
Description
ATP binding cassette subfamily A member 8 [Source:HGNC Symbol;Acc:HGNC:38]
Coordinates
chr17:68867292-68955392:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
161
chr17:68949312-68949472
-
20.2
42.98
0
Exon Skipping
101
chr17:68941939-68942039
-
91.45
39.66
0
Exon Skipping
104
chr17:68933168-68933271
-
98
90.94
0
Exon Skipping
142
chr17:68929561-68929702
-
23.59
100
0
Exon Skipping
186
chr17:68929049-68929234
-
95.6
88.45
0
Exon Skipping
148
chr17:68927916-68928063
-
23.35
100
0
Exon Skipping
169
chr17:68924701-68924869
-
94.14
94.58
0
Intron Retention
1701
chr17:68885316-68887016
-
8.7
39.68
0
Intron Retention
799
chr17:68884397-68885195
-
20.17
96.22
0
Intron Retention
448
chr17:68883883-68884330
-
11.75
42.12
0
Intron Retention
1071
chr17:68882720-68883790
-
9.47
39.11
0
Intron Retention
73
chr17:68876555-68876627
-
11.41
41.92
0
Intron Retention
2585
chr17:68929703-68932287
-
10.68
34.83
0
Intron Retention
1115
chr17:68918186-68919300
-
63.53
78.82
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000020620 Abca8b 1-to-2
Mouse mm10 ENSMUSG00000041828 Abca8a 1-to-2
Mouse mm9 ENSMUSG00000020620 Abca8b 1-to-2
Mouse mm9 ENSMUSG00000041828 Abca8a 1-to-2
Rat rn6 ENSRNOG00000004040 Abca8 1-to-1
Cow bosTau6 ENSBTAG00000006896 ABCA9 2-to-1
Chicken galGal4 ENSGALG00000021395 4-to-2
Chicken galGal4 ENSGALG00000021399 4-to-2
Chicken galGal3 ENSGALG00000021395 4-to-2
Chicken galGal3 ENSGALG00000021399 4-to-2