Special

ENSMUSG00000020620 @ mm9

Biotype
protein_coding
Gene Symbol
Abca8b
Description
ATP-binding cassette, sub-family A (ABC1), member 8b [Source:MGI Symbol;Acc:MGI:1351668]
Coordinates
chr11:109793504-109857159:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
102
chr11:109843481-109843582
-
25.35
41.98
0
Exon Skipping
56
chr11:109796037-109796092
-
94.06
51.43
0
Exon Skipping
167
chr11:109816349-109816515
-
90.51
24.49
0
Exon Skipping
102
chr11:109842992-109843093
-
94.74
26.32
0
Exon Skipping
205
chr11:109842164-109842368
-
95.72
17.39
0
Exon Skipping
186
chr11:109835822-109836007
-
95.05
14.81
0
Intron Retention
13832
chr11:109843094-109856925
-
8.57
35.9
0
Intron Retention
757
chr11:109807622-109808378
-
16.69
41.57
0
Intron Retention
386
chr11:109807173-109807558
-
12.96
41.49
0
Intron Retention
214
chr11:109797797-109798010
-
12.39
37.66
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000141338 ABCA8 2-to-1
Human hg19 ENSG00000141338 ABCA8 2-to-1
Rat rn6 ENSRNOG00000004040 Abca8 1-to-1
Cow bosTau6 ENSBTAG00000006896 ABCA9 3-to-1
Chicken galGal4 ENSGALG00000021395 4-to-2
Chicken galGal4 ENSGALG00000021399 4-to-2
Chicken galGal3 ENSGALG00000021395 4-to-2
Chicken galGal3 ENSGALG00000021399 4-to-2
Zebrafish danRer10 ENSDARG00000074041 abca5 5-to-1