Special

ENSMUSG00000020620 @ mm10

Biotype
protein_coding
Gene Symbol
Abca8b
Description
ATP-binding cassette, sub-family A (ABC1), member 8b [Source:MGI Symbol;Acc:MGI:1351668]
Coordinates
chr11:109932190-109995845:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
102
chr11:109982167-109982268
-
24.55
41.98
0
Exon Skipping
56
chr11:109934723-109934778
-
92.65
100
0
Exon Skipping
167
chr11:109955035-109955201
-
90.5
27.84
0
Exon Skipping
102
chr11:109981678-109981779
-
95.11
22.22
0
Exon Skipping
186
chr11:109974508-109974693
-
95.14
14.81
0
Intron Retention
13832
chr11:109981780-109995611
-
8.93
35.9
0
Intron Retention
757
chr11:109946308-109947064
-
15.81
41.57
0
Intron Retention
386
chr11:109945859-109946244
-
12.66
41.49
0
Intron Retention
3409
chr11:109942358-109945766
-
17.08
38.98
0
Intron Retention
214
chr11:109936483-109936696
-
13.23
41.66
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000141338 ABCA8 2-to-1
Human hg19 ENSG00000141338 ABCA8 2-to-1
Rat rn6 ENSRNOG00000004040 Abca8 1-to-1
Cow bosTau6 ENSBTAG00000006896 ABCA9 3-to-1
Chicken galGal4 ENSGALG00000021395 4-to-2
Chicken galGal4 ENSGALG00000021399 4-to-2
Chicken galGal3 ENSGALG00000021395 4-to-2
Chicken galGal3 ENSGALG00000021399 4-to-2
Zebrafish danRer10 ENSDARG00000074041 abca5 5-to-1