MmuINT0008073 @ mm10
Intron Retention
Gene
ENSMUSG00000020620 | Abca8b
Description
ATP-binding cassette, sub-family A (ABC1), member 8b [Source:MGI Symbol;Acc:MGI:1351668]
Coordinates
chr11:109981678-109995845:-
Coord C1 exon
chr11:109995612-109995845
Coord A exon
chr11:109981780-109995611
Coord C2 exon
chr11:109981678-109981779
Length
13832 bp
Sequences
Splice sites
5' ss Seq
AAAGTAAGT
5' ss Score
9.72
3' ss Seq
CCCCCTTTCTCATTAAATAGGGC
3' ss Score
9.95
Exon sequences
Seq C1 exon
GGAGCAGCCATGCGCGGTCACGTGTCCGTGGTGTTTGGCAAGACCAACCCAGAGCTGAGATCATAAACTCCCGCTGAGAGCAGCTTTCACCAGTCGCGTTCACGGACAGCAAACAGTTAAACTCTAGAAAGGTGCTGGAGAATAGGGGGAGGGGAAGGTGTCTCACTTTATTATTCTAAACAGAGCCCGTGATTAAATGGTGCGGCTGGAGTCCCTGCTTGGCATTTCCCGAAA
Seq A exon
GTAAGTTTCTGAGATTTTGTTTTCCTTATCAGGTTTATTTGTTTGGGCATCGGGATTATTATTGTTGTTGTTATAATAAAAAAATGAACCGTTTTATGAGCTGAATGCTAACCATCTGTGTCAAAGTTGGTTTTTTAAAAATCAGTGGGCTATTCTGAAATGTTTTGGTGTCTGGTGTGTAATATTAAATAGAGCAAGGTATTCAATTAAAATATATACCTTTATATCATGATGTTCTGCTGAGCCATAAAATGAGTGTGCGAATGAGCTGAAATTGGCCAACAGACTGACTGTCAAGCTGAGACACTTCAGGATTGAGTGGGAAGCTTGTACTGCCTCTGGAGTTATTTGCTTTGATGATGTAATTTGGCAATCTGGGGTTAACTTTTCTGAGACTGCTTCCGGAGAGGGTTCACAGAACACTTGATGAATAGCAAGCTGTGACTGTTCTTGGATCTCTGGCTGTTCTGACACCGTGGGGGAAATGAGAATGTGAAATGTGCAGGGCTCTCCTGTCTCACAGCCTAACTTTGAATGTTCATCCTTCAGCACAGAAGTGTCAGCCTCCCAGGGCAACAGGGGAGGAGAAACACTTAGTCTCTCGCCCTCTGTCTCTGTCTGTCTCTGTCTCTGTCTCTGTCTCTGTCTCTGTCTCTGTCTCTGTCTCTGTCTGTCTGTCTGTCTGTCTGTCTCTCCCTCCCTTCCCCTTTCTCCTCCTCCCCCCCCCCCCCCCACTTAAACATTTTGGATATTATTTATGCCACAGATAAGGAGGGTTCATGTCTTCAGTATTTTTACAAATCGCAGAACACACACACCAGGAGTGGACAGACAAGGAGGCGATTTTAATTTACAAATAAAATCAGAGAAGTTGCAGACAAGAGTGCAGTTGCCTGCAGGGCTGTGCCTGATTCTGTATTGAGATCTCTACTCAGACAACTCTGCCACCCCAACAGACTACACAGTCCCCTCAGAAGTTGTTCCCTCTGGATTATCCGGACTGAGAACAACTCATGAGGCACCTTAGCGGCCCCTCAGTGGGCACTCCAACCTGATGCAGCTCCACTCTTGGCATCCATTCCTTCCTTCTCTCTTTCCATGAGTTGTCTCCTTTCTTTTCTTGCCTGTCTGCCTTGCCTGGGACCTCCTTTAACAGCCCTATGCAGGTTCCTCCTGTGGCAATAGCCCCTGAGCCTGCTTCAGCCATTGTGTCTCCCATTAGACTGGCCAGGACTTATCACCTGAGCTTCGACTCTAGAGAATCCACGAGAGTGAGCTCTCTGTGTGTGGTAAACATGAGGAGCACTTCTGGTAAGGACCCACCAGCTTGTTGCTGTGGATCATCGTGTGGGGTTCATCCCTAGCACTCGCTTCAGTTCTTAGGACTTAGAACCAATTTTATGGTATTCACCATGGAGCTACTGACTTTGTGGTCAAAAGCCCGGGCCATTCACGCCCCTGGCTTCCCAGAAATCTGATAAGCATGGGATTCTGGGGAGCCTTCCCTTTCATGATTCAGCTTAGGTATCCAGTGTCCTCCCTCAGGAAAAAAAAAATGCTTTTGAAGAGCATTTACATCCCTTAGTTTGCAGAAGAGGTTTCACCAGAGCATGTTTGCATAGTATTGATTGTTGAAGTTGTAGCAGGAGGTGGTGTTATTATGCACTAAAACATCTTCTGCAGGAAATTTTACATTCCCATTTAATTATTTATATATATATATATATATATATATATATATATATATATATATGCAAATCCCCTTATCAAATCACCCACTGATATTTACACACAAACACACCTGCCCACCCCCTCTCCTATAGATGATCTTCCCTCTCTTCCTTCGGTGTTGAATTAGCTAAAGCTGTGGTTTGCTGCACACCTGTGGGAAAGTTTGTTCTGTTCTGCTAAGTAGTCTCTATGGCAGTACAATAATGCTGTTCTCTTCAGCCGGTTCTGGGCAAAGCCCCTGGAATGCCCTCCTGCGTACTGCCTCACACACAAGGCAAAGGATCATGAATTCCCAATCCAGATGAAGCCAGTCCAGAGCCACTACCTGGAGTTTCTACCTCTGCCTCCCAGATACAACACCTCACCACAGAAATGACCATTCACTGGAAAGATAACAGATTATTATTCGTAGACATAAATCTATTTGTGCTTACTTCAGATTAAAAGTTGAGTCACATTTCTGTATAATAACCGGATCAGTTAGAATCTATCCGAGAGCTCATATATGTAGACAGTATTTGTAAAAGATAAATCGTAATAAGAGCTGTGAAATTTTCATAAAATAAATCACAGTTCTTTGGGAAAATTAAGAGCAACCATTAAAGATATATGAATACCTTTATAATGTGCTTTGAACAGGACAGGAAATTGAGGAAAGGAAAAAAATATTTAACAGCTCAGCAAAAAATGATAAGAATATAAAAAGTATGATTAGAATAGAGGTAAATAAAATCAAATATAAGAATAAAACATAGTGAGAGATTATCCAAAGCAAAGGTTCATACATAATTTAATTCACTTTAAAAATATTATTATTTATTAATTAGGTTTTAAACAACAGAACAGTTGTCAGTATTTTATGAACCAAATATTTGAAACGTCAGCCAATGCTTTAAAGTAAAGAGCTAGATAAAGGTGTGTGCAGACAAATGTTAACCGGGAGAAACATGGGGTGTCTGTGTTGCTTTAAGAAATCCAAGTCGTCCCCCCACCCAAACACACACACACACACACACACACACACACACACACACACACACACACACACTACATAGCTGGGATAGTGGCACTGTGTCTTAAGCTTTTCACCATTCAATTCTACTACAATAGTAGCAGAGTCAGAGGAGGGCAAGCAGACACACCCCAGGCCTCCAACATCTACCATGGCATTACTGTTCCCTTCTGTAGTCAAAACAGTAGTCAGCTTGCTTGCTTGCTTTTATTGGTTATTTTGTTTATTTACATTTCAAATGTTCTCCCATTTCCCAGTTTCCCCTCTGCAAGCCCCCTATTCCATCCTCCTCCCCTACCTCTATGAGGGTGCTTCCCCCAACCCCCTCCCATCTCACCTCTCTAGCATCCCACTATGCTGCATCATCAAGCCTCCACAGGACCAAGGGCATCCCCTCCCATTGATGCTAGATAAGACAGTCCTCTACTACATATGTAGCTGGAGCCATGGGTCTCCCCATGTGTACTCTTTGGTTAGTGGTTTAGGTTCCTGGGGTCTGTTTGGTTGATACTGTTGGTTCTTCTTATGGGGTTGCAAACCCCTTCAGTCCTTTCTCTAACTCCTCCATTGGGGACCCCATGCTATATCCAATGGTTGGCTGTGAGCATCTGCATCTGTATTGGTCAGGCTCTGGCAGAGCCTCTCTGGGGACAGCTATACCAGGCTTCTGTCAGCAAGTGCTTCCTGGCATCAGCAATAATGTCTGGGTTTGGTGCCTGCAGATGGGATGAATCCATAGGTGGGACAGTCTGGATGGCCTTTAATTCAGTCTCTGTTCCACTCTCAGTCCCTGTATTTTCTTTAAAAAGGAACAATTCTGGCTTAAAATTTTTGAGATTTGTGGGTGGCCCCACCCCCTCAACCGGGGGCTGTGCCTATTCCTTGGTTATGGTCTCTACAGGTTCTATCAAGTGACACTCAGAAGGCAGAGGCAGTTGGATCTCTGTGAGTGTGAGGCCGACCTACCTGTTCTACATATCGAGCTCCAGTACAGCCAAGGTTTTACAGAGAGAACCTATCTCAAAAGACAAAAGAACTTAAAACTTGACACATGAAGGTTTTAAAGACACAAGCAAGAGTTAAAAATAATTAGCTTACTGATGTAATCTGTTGACAGTAGCAGATTCTATTAAATATAAATACCAAGATATGGTAAAGCATTTGCTAAAATGCAAAAATAAGATGCAATACAAATTATGAATCAAAACATCAGGAAAGTAGGAAAACAATGGACATTCCATTTCCTAATAATGACTTGACCAATAGTGCAGAGAATGTCACATCTGATGGTGAAATGTTCATATATCTCTTAGATTGGGGCAGTGTTTTAGCGGGGCTCTTCTCACCCAAGAGAGGAGGGCGGGATCAGCTCTTCATGAATTTGAAGTTTTTGCTGAGTCACACAGACCTAGCCCGGAGCATGCAGAGGCAGACCATGATGAATCAGCAGATGGATTTTTGTTTTTGTTTTTGTTTTTGTTTTTTGTTTGGGGATTTTTTTTGTTGTTGGTGGTGGTGTTTCATTACACTCTGTTTGTTGGTTTGTTTATTTATGGGGAGAAGAAAGCATTTTATTTCCCTGACTGTTCATGTGAGTTTATGAATATTAACCTGTTTTATTTTAATCAGTCTCAGAAGTGACTCAACCTTCTGTAGCTCACATGTTCTATGGCATGAATCATAAAATAATTTCATAACAGGATAGATGCAACCTTTCCTATAAATTTAGTAGGAACTCGAGTTTTGTAGCATCTCTGAGTCGCCCTTAGAAGCCTGCTCCTTTCTACTGAGAGACAGAAAGGGAGTGGATCTGGCCAGAAGGGGAGGTGGGGGTGGGGGGAGCTGGGAGGACCAGAGGAAGAGGAAACTCTAATCAGGATATATCATATGAGAAAATGAGAGTAATAAAGTACTTATGTGAGTTTCATCCAAAACTTGATTAAATTAGGAATACAAGACATTAGGCCTTCAACGATGATTATTTAGCTCTAAAGTATTTAAGTATTATAATCAGAAACATATTAATACTTATTTTCTGTCTTGTCTGTCTCCATCTCTATCTCTGTCTCTCTGTCTCTGTCTCTCAATCTCTCTCTCTCTGTTTGTGTGAGTGTGTGAGAGAGAGAAAGAGAGAGAGAGACAGAGACAGACAGACAGAGAGAGAGAGAGAGAGAGAGAGAAAGATCATATGGACTGAGAAAGGTGTGTGTGTGTAAAACTAGCAGTTGGCAGCCACACACACACACACACACACACACACCCTCCTTCCCTCTCCCTCTCTCCCTCCCTTCCTAAACATTCTTTAAGTCTCTTAGTTTTATTTATAAGCTCTTTCTATGCCATCCCCACTCATTCCCAACATACCCGCCCCCAACTTCATGTCTAATTTTTTCCTAAACCATTGAGTCAAATCAGTACTGCCCATATGCACACTTGTGTGGCGTCATGCATCAGGCCAGCTATTATCAACACAGCTATTATCCTGTACAACAGCTCTATCACAGCTCCAAACCAGCCCCTCAGAGCATTCCTCCTCATCCTCAGGCTCTTACATCCTTGACCCCTGTGCTATGACATTACCTGCATCTTGGGAGGGGACTGATGTAGCTGCCCCGTCTATGTCTCTCAGCATTTTGAACAGTTGGAGTCTCTAGAGACTATCCTCTGCAATAAGAAACATCTCTCACATGGGTTCATGAGAACACATTAGTTCATGTTTAGTGGGGCCGTGAGAATAAATCAAACCAAATTCATATGTTGACTCAAATACAATAAAATCTAATTTCTTGCTCGCTAAGCCATGTGTGTGGCCAGTGGTTGGCCTCTCTGCTCTAAGATTTTACGGTTGCAGCTATTGCTCGCTTGGTACACCATCTCCAAACTCATCTAAAGAGGGGAAATGACAAGAGAAATCCAACCATTTCTTTAGATTAGGACTCACAAATGGCATGCATTTCTCCTGGTTATCTTCCACTGGTGAAAAGGAATTCCTTCCTCATTGTGAATGGAGTAGTGTTTGGAATTAGAAAAAAGATAATGTCAAAACTTGGTCAAAAGGATGGCCCACGATGAACAATACCTTGGAGAACTGTGAGAGAGGCTCTGTGAAAAAGGCAGAGAGCCTTTTACCTCAGGTGCATTTCCTTGGGTGTGATTTTGTGTCTCCTGTGTTACATATTTACATTCAATTTATAAGGCATGTTTATCCTTCTTGGATGTCAGACCATAGCTGTAGAACCCAGTCTGGTCAGTGTACCCTGAATCTGGATATGACCTTCTGCCTCACTTCCATGCTTTCCCAGATATAATCTATAGTACGTGCCAGGCCATTGCATTTCAACTGCTCTGTCCTGAGAAAGTTCTGGGAAAGGGCTGCTCTGTCAACATTTACTATGGGCTTACTGACATTTATTGATATATTTTTCTGACCATGTGTTTTAGAGCTCAGCCTTTTTTAGATCATTGCTTTCTTTGTTAAATCCGTGTATATAAATGTACACTGAAATTGAAGTCAGGTTGTCTGTAGACTGCAGTCTGCCCCATTCTGCCAGGTCCTCAGATCCTAGCCAACAAGATCTGCACAGGTCAATGGAAGAGGGCACAGAAAGAAGATAAGATGTCTTGGTGAAGGGTTGGTGGTGTCTGACAGAGAGGGAAGGTGTTAGGACAGTCAAGACCACCGTGAAGGTCCTCCTTCCTCCTATTTTGGAACATTTACTATGGAGTTCCAAACTGCCTTGCATATAAGAATTGATGCAACAAAACTACTTGAAAGCATAGATTATTTAAAATCTCACACACATATATCTAGCATTTGAGAGAGGAGACATAAAAAACAATCAAAAATGAAAGGAAAGAACTTAAATAGTCAATGCCAGGGCAATTTGCTTAACAGATATAAAAGAAACACAGTTGCCAACAGCATCTTACTTAGGTCCTGTGGTCTCACACTGTATATACACAGCTTACTGACCAAAAAAAAAAAAAAACAAAACAAAACAAAACAAAAAAACCAGTTAAAACCACTTGAAGAAAGTGAAGGATATGTTCATATAATTTTCAAAACGTGGAAATGCTTTCCTTTTTTAGTGAATTTTTATTTGTGTACAATGCATGGACCAGCTTTGCAGTATGTATACCATGCGTGTGCAGGTGCCTATAGAGATCAGAACAGGGTGTTACAGATAACTGTGAGCTGCCCAGTGTGGGTGCTGGAGCTGAGCCTGGTTCCTCTGTAAGAGCGACAAGTGTGCCCCTAATCACTGAGCCATCTCTTCAGCCCCAGAAGTGCTTTCTAAATAAGAAATACACTCAAAATACAAGGTTGGTAGAACTGTTAAATTGGGTTAAAACTGAAGCAAAATGGGTGTACAAAGTGCAGTTGGCAATTTGAGATTAGCAAAGTTGATGAACTAGCAGCAAATGTGACTCAACAGACTTACCAAGCTAGACTATTTACAGAAGAAATCTAAAGAGCATTCAGTATATAGATAAGACAGCTGCCTTCTGTACAATACAATACAACATAAATCAATAGGTTGTCCTCTACACAGCCCCAGATTGGCCAGCAAATATTTGTGTGTACTTGCTATGAATCTAAGGAACTCAATTTTTTTCTTTTTCCCCAGTTTCTGTTCCATAAACACAGTAACACGTTCTGCCTTATTGGGTATAGATGTGTGTTGTGTCAGGCCAGCAGATCACAACATGGGTTCTAGCCTGGAAAGGCATTTTGGAAACCTGGAAGAGAAGAGGGTCTAGGTGGCAAGATAAAGAAATGTAGCTAAGACAGGCATTCTGATCAAAGCTCAATTTTACTGTTCTGCACGCAATTATAAAGCAGGGGAAGGGGCCCGATTCCCGCCAATTAGTCTTGGGGTCCAATAGCAGGGTGACCATGTGCACAGCTCCGAAGAGCAAAGCAGCAGGTTCCAGCAGTGGGCATGGCAGAACGATTGAGCGGGAAGCTCCACCCCTGAGCAAGCAGGTTTCAGGCTGGGGGAGGGGAGACTACAGATGTGCACTGGTTCGATAGGCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGACAGAGATACAGATAGCACAGTTGCATACTCTCGTGAGGGCCTAAGGTCAGCATCAGCCCTCCCCTGATCAGCCTCACCTTATTTAAGTATTATCCGGAGCTCACTGTTTGGCTAGGCTGGCTGGCCAGCATCCCCTGGAATCTACCTGTTTCTTCATTCCTCATTGTCTGCCTCATGGGGAACAGATGTGCACTGCCTCGCTAGGCTTTTATGTGGATGCAAGCTGAACTACGGTCATAATATTTATACAGCAAGAACTTAACCTTTGAGCCATCTCCCAGCCCCTACACTTAACTCTCAAGGACACTTGGACCACAGAGGAGATTTCTCTCCGTTCTCTCATCTCAGCCCCATCAAGCAAGGTACCTTTCAGCTCAACCCAGTGCCTGAAATATAACAGAGACCTTTCTGGATTGAGCTTCAGTGTCAGCTTTAAGACTTAAGCCTTGAGGTGGGCTTTTCCTCTGCACTTTTCTTTTTCCTACCCGTTCCTACCTTGTTCCTGCTGGGAGGTCTCAGTGTAGCTTAATTCCATGCCCTGTCCCTATTGCAAAACTTAGCAATCCTAATGGTAATCACCTTTTTTTTGCTTAGTATAAATAAGCCTTTTGATGAAGGAAGGGTGGTTTTCTTCGTCTCCCCTAACACAAACAGAATTCAGTCCCCAGAAGCCAGACATGGGTGGTCTATATGTGTAATCCCAGGGCAGGGGGGTTAGAAGTGAAACACATGAGGATCCCTTCGGCTCTCTGGCCAGCCAACCTAGACTACTTTGAGAGCTGCAGGCTCAGTGAAGGACCTTGACTTAAGGCACAAGGTGGGTAGTGACTGGGGAATACATTTATCATTAATTTCCGGCCCCCTACATGCATATGTACACACAGACAGACACATAGACAGACAGATACACACACAAACACAGACACCGACACCGACACAGACACAGGCACAGGCACAGACACAGACAGATACACACACATACACAGACACAGACACACAGACAGATACACACACAAACACAGACAGATACACACACAGACACAGACACACAGACAGATACACACACAGACACAGACACACAGACAGATACACACACAAACACAGACACAGATAGATACACACACAGACACAGACACAGCTACACACACAAACACAGACACAGACACCGACACAGACACAGACAGATACACACACACAGACACAGACACAGGCACAGGCACAAGCACAGGCAGACGCAGACGCAGACGCAGAGGCACAGGCACAGGCTCAGGCACAGGCACAGGCACAGGCACAGGCACAGGCACAGGCACAGGCACAGGCACAGGCACAGGCACAGGCACAGGCACAGGCACAGGCACAGGCACACACATACCTTTTATTATTCTCCTGCTTGTACCCATTACCCATCAGCAGTGTAAGTTTGCCTGAAACTTCAGTGGGAATACAGTTTAGAGAATTTGGAGATTGCTTCTAGTAGACACTGGCTTCTATTGCATTCCCTTGTCATGGTCCTGGTCTTTGTCTGGGCCTTTTGGGAACCCCTGTCCCTGTGCATCTTTTGCCTGTAGAGGAAAACATTTTGAGAACTCTCTCTTGTCTCTGTCTCTTGTTTTCTTCCATTGTATTGTGTGCATACAAGGCAACACTTGGCAAGCAAGTGCTGTCCCTAGACTGCCACGGACCAGCCCCAGTCGGCCTCCCTCAATCTGTGGAAGAAATCAGGGGGTTCCAGTTACAGGTGGGCAAGGAGTTGGTGAGAAGGGGGTGACAGACAGACATGGACACAGAGAGTGTGCTGTATCTGAATGTAATTTGTCAAATCGAGCATCAAACTTTTAATACAGAAGAAAATAGGGAAGTTAGGTGACACATTGGCAAGGTACAATGAGGTTTCTGGATGCTTAATGGCTCTTACACAAAACAGAGGAATGCAAACATAAAGACTGGCAGGAAGTGGGCAATAAAACAACTGAGACAAAGTCAGCTCTATCTAAGGTCAGCCATATTCTTAGAAGCCAGGTGTGAGGTCTTTACACTCCTGGGGCAAGGGTTTTCACACCCAAGTCATGGTTCTAATTAGGGAGTTCCGCTCTAGCTAACCTCATGAATAATGCAATACTCTAAAACCACAGCCTGGTCTACTTTCCAAACCATTTTAAATTCCTGTATATGTGAGTAGCTCAGCTTTTATTCTAAGTGATTGTGTGTGGGGACTTTCTAATAATAAGTAATGTAGTCTGCCACACATAACTATAATAAGAATTCTAAACTTACTTTGCTAAGCTTGCCCTGAGATTTCTAACTCTATGTAGTAGATAGCAATGCCTGATTTCTTTCACTATCTTTCTTACAATACTAGAGGCAATTCTGAATGTCACTGAATAGGCAACATTCTTACTGAATTCCAAGCCCAGGGTCGGCTCAAGGACTACTTAGGGTATTGGTGAAGGCCAGGAAGCAAAGTTCAATTTTGCTTAGGTATTTGGCAAGTCGTTTCTTGGAGGCACTTATAATAAAACAATACTGAAAGAAAGCACACAGATCTATTTGCAAGGACAAGTTTGGAGCATTCATTATATGGGATGCCACGGTTCCAGGAGACTAAGTTCCCGTGAACTTTTTACCTCAGGACTGCGTCCAGGTTTCTGGGCCTGTCTTATGAGAGTCACTACTGGAGTGGATGTAGCACTAGACTGTCCATAAAATCTATTCCACCCCCACCCCACCCCCACCCCGCCCCGCCTCCAGAGAGATCCATGCATGTCCTCTACAGCCCTCTTCTTCACATAACATCTTTGGGTCTATGGATTGATTGTAGCTTGGTAATCATTTACTTAACAGCCAATATCTACTTATAACTGAATACACACCATATTTATCTTTCTGGGTTTTGGATACTTTCACATAGGATGATTTTTTTTTCTAGTTGTATCTATTTGTCTGAAATTTTCATGGTGCCATTTTTATTTTATACAGCCTAGTTAAAACTTTTATTGTCAGGAGCCATAATGGGACAAGCTAATAACTAGCAGGTGATCATCCTGAAGTGGCCTGCCTCAGATTATTATATAATCTTCAACAGGTGAGCCCTCATTAAGCAAGGCTGTGAGGGACTCATTTTAGAAAAGATCCCTGATATTAATATGCTTTTCCTGTTATGTTAAACATATATAACAACCACTAAGTAGTAGCACACCCCTTTGAAGCAGATCTCTGCAGATCCACGAAGATGTACTATCTTGTAGTGATGCTATATAGACAAATAGACGACTCAAGATTTAATGATGATCCTATAAGAATTCCTAAAATTATACCTGTGATTATTAAGCTCTTTTATAATGGGACTGCTATTAGGTCCTTTTCTGATAGTCAAAGCTGCAATGAGAACTCTGCCAGTCTCCCAAGTGTCACCAGTTAATTACTCTTAGATGGTAACCAGACTGTCTCCTACTCAGAGCACATTCCAAGAGGTTATAAAACAATTTACCAAAGGTCATAAAAAAGGAACTAACAATTTATTATAGGTGTTAAGACAGAAGGTAAAATATCGACTGGGTTTATCTATACAAAACTTCACTAATAACTTAGTTATGGTTTTAAACCTTCAGTGAACCTGTGGAGTTGAGACAGGTGATAAATTTTAGCTAGATAATTACTCCTAATGGATATGCATGTAAACATTTGCTATTGTATACTTCTATTTCAATTTATGATTTGATTTTTTGGGTGAACTTGTGATGAACTTTGTAACATGTGATCATGTATTCTGAAAGATGTATAAGTACTGAGGACAAAGAGATGAGAGAGCATGAGACCAATAGAGGAAACTTTTTTGCCTTTCCCCACTTAGACTAGAATCTTTTCCCTTTACCCACTTAGGATCTTTCCGCTTTTCCCCTTTGATAGCTTTCATAGGAAACTTTTTACAACTTAGTAATAAACTCAATAATCTCTTATCTAAGTGTCATCTCTTCCTGCGACTTCTGACTGGCAGGCTGAAAAGTTAGAGCCCAGCAGTTCCTGCTGAGATAGAACAAAGGCTGCATTACTTAATCCTCCTCCATTGTTAGGCTTACAGGTGTTAAATGCCTAAAGCAGCAGTCTTTTTTTTGGGGGGGGGGGGTTGGTTTTTTTTTTCCAAGACAGGGTTTATATATATATATCCCTGGCTGTCCTGAACTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAATCGTGCACTACCATGCCCGGCAACCAGCAGTCTTTTACCCTCAGAAAGTACAAGAAAGATTTTAGGACTTTTTAGAAGTTATCATCAGCATTTCAGTATAGTTAGAGAGCTAGAAGGCCCTGAAACCCTCAGACTTTAAAGCCATCACCAGAGTCCTACTCTAACTCCACCACTACCCTGGCCCGGGCTGTGAGGCTCCCAGCATCTTATGTGTAAATGAACAATTTTTTAATTTCATTTTAATTTTTATCCATTTTTCTGTTGAGGGACGTCTAGATTGTTCCCGGTCTCTGTCTACTAAGAATTGAGACGAAATGAACATAGTTGAGCAAGTGTTCTTGTGGTAGGATGGAGCATCCTTTGAGTATATGCCCAAGAGTGGTATAGCTGGGTCTTGAGTTAGATTGAATCCAAACTTTCAGATTAACTGCCATTCTGATTTCCATAGTGGCTATACAAGTTTTCACTCCCACCAGCAATGGAGGAATGTTCCCATTGCTTCACATCCTTGCCAAAATGAACTGTCATTTGTGATATTGATCTAAGCCACTCTGGCATGTATAAGATGATAGATGCATATAGATATACACATATAGACATTAACTATTATTAGATATTAGATTTTAGCTTAGCACTTTTAATTTCACCATAAGAAAAGGTAGGTCTCTGACTCTAATGTCTGCTCTTGGGACTCTTTTTCTTCTATTGGGTTGCCGTGTCCAACTCCAATGTGATGGTTTTTGCTTCATCTTATTATATTTTATTTTGTCATGTCTGGTCGTTATCTCTTGGAAACTTGCTTTTTTTCCTAATGAGAGTCAGAAAGGGAATGGATCTAGAAGGGAGGGGAGGTGGGATGACCTCTGAAGCGTGGAGGGAGGGGAAACTATAATCAGGGTATATTATATGAGAAAACAATCTATTTTCAATAAATGAAAATAAATAAATAAAAAGAACTAGAGTGTGTGGTCTTTGTAATAGGGGAGGTTAAGGAAATGAAGTTGTGAGGAAAGGTCTCTACTGTACATTAGTGTGGCTGAAGTCAAGGTTAGAGAAAATGCACGGAGACGTACAGCCTCTGTGTTCTTTACATGGCAGAGAACCATTTCGTCTGAGCAGTAAGGAAGTATGCTTCCTGTATAAGCCTGGCCAGCCAACTGCCTTGAGCCAAGGATGGCCTCTTCTTTCTAAAATGTTTCTCTCCGTTCTGCTAGAGCTTGGATTCTGTCTGTCTCCTAAACTCTCCAAGAGTTCATATTCTAGACACTTGGCTGCCATGTGGTGATGTTAAGAGTGGTGGAACCCTAGAGGAAGTGGTAAGTATGGGTACCACTCTAAGAAGAAACTGATGCTCATCCCGTGAAGTGTGTTAGCTCTCCCTTCCTGTCCCTGTACCATACCATGCTACAGCTTAGGAGACCTTGCCAAGATGAAAAGTGCCATGCTGTGTCACCAGGAAAATTGACCCAAATAACCATCTTTCCTTTGTGAAGTACCTAGCCTCATTATTTTAATGTAACAATAGAAAACAGACTAATAAAAGTTCTGAACTGACAAAGCTTGACAGAATGGGGATTTGGGGAAGAGATAAGCGCTCATTTAGATCAGTGACCTCAGCAGGCTACTCTTCGTCTCTTGGCTATCTACTCTTTCTTAAGCACTTCATTTATTTTGTTTTCTCTACCCCCTTTCTCATTAAATAG
Seq C2 exon
GGCAACATGATCAAGAGAGAGATAAGTGTGCGCCAACAAACTTGTGCTTTATTACAGAAGAACCTTCTTAAGAAATGGAGACTGAAAAGGGAGTCCTTGATG
VastDB Features
Vast-tools module Information
Secondary ID
ENSMUSG00000020620:ENSMUST00000020948:1
Average complexity
IR
Mappability confidence:
NA
Protein Impact
5' UTR
No structure available
Features
Disorder rate (Iupred):
C1=NA A=NA C2=0.000
Domain overlap (PFAM):
C1:
NA
A:
NA
C2:
PF126982=ABC2_membrane_3=PU(1.0=12.5)
Main Inclusion Isoform:
NA
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Other assemblies
Conservation
Chicken
(galGal3)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Pre-implantation embryo development
- Ribosome-engaged transcriptomes of neuronal types
- Neural differentiation time course
- Muscular differentiation time course
- Spermatogenesis cell types
- Reprogramming of fibroblasts to iPSCs
- Hematopoietic precursors and cell types