HsaINT0000828 @ hg38
Intron Retention
Gene
ENSG00000141338 | ABCA8
Description
ATP binding cassette subfamily A member 8 [Source:HGNC Symbol;Acc:HGNC:38]
Coordinates
chr17:68941939-68955351:-
Coord C1 exon
chr17:68955219-68955351
Coord A exon
chr17:68942040-68955218
Coord C2 exon
chr17:68941939-68942039
Length
13179 bp
Sequences
Splice sites
5' ss Seq
GAAGTAAGT
5' ss Score
9.82
3' ss Seq
TTTCTTTTTCATTAAACAAGACA
3' ss Score
1.67
Exon sequences
Seq C1 exon
CAGAAGTCAAATAGTTAAAGCAAATTCTAGATACATGGTAGAGACCAGGAGAAAATATGAATAACTTTCTTCTAAACAAGGAGCTCAGTGGATAAACCATACCTCTAGATTCCTTGCTTCCATTTTCCCAGAA
Seq A exon
GTAAGTTCACTGTATTTTTTCTGTTTTGTTTTGTATTTTGCTTTTGTGTGTGAGTTTGTTTCAGAGGTTTTGTCTTTTCTTATTCCTATCACAAAATTATAAATAAACCTTTATAAACTGAATGACAATCATCTATGCAGAAATTATTTTGAAAAATATTGGGCTACTTTAAAGATTTTATATCTGGTAATTAATATTAGATAAATAAAAACATTGAGTTAGAATGTTTTTTAAAAAATTATGCAAACATTATGTTGTTTTAAACATAACTGAGTGTAGAAATAAGTTTAAATTGGCTAAAAATTTTTTGTGAAGAGCTTAGAGTTTTAAGAATTGGGTTGGAAGACTGAGTTGTTTTTGAAGTTAAAGTTATCTACTTTGATTGCACAATAATGTAGGGCATTTTGGATAAGTGTTCTTCTGACTTTAAGACTGTTTACCAAGAGCACTTACAGAAATATTTTTATTGTTCCTATCGCTCACTCTTAGTCTATAAGAATTTTAGAAATGTAAGATTCTTTCTAGGATCTTTTACTCGTTGGATACAGTGAGTTGAATCAGAATGTGAAATATGTAGCTTCTCTTTACCACAATGTTATTTAAAATGTACATTGGTAAAAAGAATTTTCATACTCCTATAGTGAATACATGTTGTTCTGAATTTTACAACAGTATAAGAGGATAAAAATGAGTCATTACAATTTGAGACTATTTGCCATATGTATAATAAAGTATTCATGTTTTTGCTAGCCTTTACATAAACTGCAGAACATACAAAAATTGGAAAGAAACAAAGTTGGCAATAATACTTTACGATGGAAGATATAAGGGATTGGAGTCAGACTGGAGTTTGCATGCTACCTAAGACTGTAGCTGATTCCATAGTGAGGAGATCATCCTCTTGGCCAATGTCTATTAACTTCGCCAGTGAATTATGCATTTCTGTAGAGAAGCTGTGATATATTTGGGCTTGTGCATGAGGTGGAGTGTAGGGAAACATCACACTCTGGGGACTGTTGTGGGGTGGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACGAGTTAGTGGGTGCAGCGCACCAGCGTGGCACATGTATACATATGTAACTAACCTGCACAATGTGTACATGTACCCTAAAACTTAAAGTATAATAATAAAACGAAAAAAAAAAAAGAAATTCCTCCTGTACAGAGCTTGCATTGGCGGCAGCTGCTTTAAGAACCCAGAAACTTTTGCCCTCTCTGTAGGCTAGCTCACTGTGAAAATATCCCATGGATTTTACCTAAAATTGCTTACAGAGAGCGGCATTATACTTCTATAGATAATTGCATCAGTAACCAGAGAGGAGAAGTACAGCAGCAGACTACCCTCTACCCCCGGTAGGAGTAGTAGCACATCACAGTTTCAGCAAGTTCAATCTTGAGCAAAGAACATGATGTGATTGTTTGTGGGTATGTCTGTATACGGAGTGTGATTTTAGGTAAGGAGAGCCTTGCACAGCTCTCTTAAAAGTATCCATGCTGAATTTTCTGCACCTTAACCTAGGCTGCTTTACTCTTGGAACTGTCTTTCCCTCTTCTCCTTCCATGGGCTCTCTGACCTCTTTACTTGGTCTGCTTCCACTTAGGCCTGCCCCTCAGCCTCATTGCATGGCCATGTGTAGGTTCTTCTTCTAGCAGTGTTCTCTGAGACTGCTGTGGCTAATGTGCCTTCTGTTGCAACTGACCCCTGGACACCTTACTTGAGATTTGGCTCTAGAAAGTAGCACCACCCTGTGTGTGATCCTGTCCCATAAATGAGATGATGGCTTCAGTTGGGGCTCATTCACTTCTCATCACTATGGAGGAGTTCATAGAAACTGCATGGCCAACATGGCATGCATACGGAGGGAGATCACTTGCTTCAGAAGTCAGGACTTATGAGCCAAATGATGGTCTTCAGGGTGGAGCTGCTGGCTTTGTGCTCAAAAGTCTGGACCCATTCTTCCAAGTCATGTCCTTCACATGCTTCCCAGAAAACTGATGATGGTACCTTCCAGAATCTCTTTACTTTCTATAATTCAGCTTAGGTAGCCTGTTTTCTCCCACGGCAAAGACCATTTGAAAGCACTCTAGTCCTACAGTTTTCAGGAGTGGCTTAGCAAATCCTATTTGTGTAGCAGTGGTTGATTGAAGTTCTGGAAAGATGTGGTGCTCTTATTATGCACTGAATTATCTTCTTCTGGGAAGTATTTTATGTGCCTGCTGCAATAAACTGTATGTATAAATTCCCCTACAAAATCACCCCCCATATACAGACATACCCAGAAACAATCACATCATGTTCTTTGCTCAAGATTGAACATGCTGAAACTGTGATGTGCTACTACTCCTACCAGGGGGTAGAGGGTAGTCTACTGCTGTACTTCTCCTCTCTGGTTACTGATGCAGTTATCTATAGAAGTATAATGCCACTCTCTGTAAGCAATTTTAGGTAAAATCCATGGGATATTTTCACAGTGAGCTAGCCTACAGAGAGGACAAAAGTTTCTGGGTTCTTAAAGCAGCTGCCGCCAATGCAAGCCCTGTACAGGAGGAATTTCTACACTCCACCTCCTGCACAAGCCCAAGTATATCAAAGCCTCGCTACAGAAATGCATAATTCATTGGCAAAGTTAATAGACATTTGATGGTAAAAAATGAATCTACTTTGTATGTTCTTTAAATTGAAAATTGAATCACATTTCTACACAACAACAGGCGGATCACAAGGTCAGGAGATCGAGACCATCCGAGCTAACAAGGTGAAACCCCATCTCTACTAAAAACACAAAAAATTAGCTGGGCGTGGTGGCGGGCGCTTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCATGAACCCAGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCACCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCATCTCAAAAATAAATAAATAAATAAATAACCAGGATAATTAGATTGGAATTCAGCAGAGTGTTAAAATAACTAGAAGGCATTTGTTTGTAAAAAGAGAACAGAGATAATAAATACTTTTGAGTTTTCATAAAATAAGTTATAGTTTCTTAGAAAAGTATTTAAGAGTAACCATAAAAGACATATAACCACCTTTTACATCTTTGGGACAGGAGAAGAAGTGAAGAAGGAGAGGAAAACATTTTCAATTCAATAGAAGGTAAAGATGTAGACAAAACTAGAAGCAAAAGAAAAGTAGGTTTAACGTGAGAATAAGATAGAATGAGAGATCATCCAAAACAAAAATTCATACATGGTTTAATGCATCTCTTAAAATATAGTTATCTATCAGTTTAGATTTCTAAACATAATGCATTGATAGTTTTTTATATAGTAACCAAATATTTAAAAATGCAGCAAAAGGTTAACAACAAAGAGATAGAAACAGATACATTAGGCAAATATTAACCTACAGAAACCTAGTGTCTCCATATTATCAGAAATAGAAGCAACCTATTACTGAAACATAAAAAAGCAATGTTTTATGCACCTAGCTACCTATGCTTTAAATGCACTTGCTGAAAACTAACAGAGATATAATAAGAAATTGCCAAACCTATTATTAGAGTGGAAATTTTTAATTGAACTCTATTATGAAATGATTGATCTAGGAAATATAACATTAGAAAGGATGCTGAAGATTTGAAGAACACAATGAAAAAGATTGAATAGATACGTACAAAACACTTCACCTAAATGGTGAGTTACAGGTATGTTAGGTGCACGTGGAACACTTTCAAATATTAAAATATGCTGCACCAGCGAGGAAGTCTTAAGGAATTTTAAAGAAGCAGTATCTTACTGAGAAGTCATTTCTTTGGTCACAATATAATTGTTAGAAATCAAAAATAAAAAGTCACTAAAAACAAAGAAACTTCAATATAGTGAATGCTAAAGAGGTAATCCTAAGTAACATATGTATGGTCTATTGCCACATTTATGTTACATAGCAAAAAGGAAATAAACCCAAATAACAACACACAGCAATAAGCATTTGTAGTGTGGTGTCTGCAGTGGTTCCTAAGAAACTGCTGATCTTGGATAGGCTTGATGGTATCTCTGGGAGGGGACTGGCTAGCACTCTCAACTGGATGACTGAGAGGACTCAGCTTGGTTTCATTCCGCAGTAGGCTAGGCCAGGTCTGCTCTCACAGCAATGGAAGAAACAAAAAAACAAGCAGATACACTCAAGGTCTCGGGAGGCTGAGGTTCAGAACTGGTGCGACATCACACCTCCCTTCTTCTCTTGGCCCAAGTACTAGCCTGCCTTGATGACAAAAACTCCAAAATTACCAGACAAAGGGTGGACACAGACAGATGGATAATTGGGTCACTGATGCAATCAATCACTCAACTCCAGAATCCATTTTCTCAGCCACTCTGCTAACATTAGTTCGTTATTTCAGCCAAGAAGCCAAAGGAAAAAGTAGCAAAACCAACCCCCAAAAAGAGTAGAAATAAAACCGTGAAAAGTAAGAGGATAAATTAATAAATTAGAAAACATAGTAAGCAATGAAAATGATGAAACAGTAAACTGCTGTTTTGTTTAAAAGGCCATTAATACATTCAAAATTCTAGCAAGACTAATGAATAAAAATAAAAAGAAGCTTAAAAATAGAAGAAAACATACATCCATTTATAATAGGTTTTCAAAAGTATTTTTAGTTATAGATATTTTAAATTCATGCTAATAAATCTAAATATAGTTTGAAGCCAGGTAGCAGGATGCCTCCAGCTTTGTTCTTTTTGCTTAGGATTGTTTTGGCTACGCGGGCTCTTTTTTGGTTCCACATAAAATTTAAAGTAGTTTTTTTCTATTCTGCAAAGAAAGTCAATGGTAGCTTGATGGGAATAGCATTGAATTTATAAATTACTTCGGGCAGTATGGCCATTTTCATGATATTGATTCTTCCTATCTATGAGCACGAAATGTTTTTCCATTTGTTTGTGTCCTTTCTTATTTCCTTGAGCAGTGGACGGCTTTTTGCTTGTCTATTGTTGGTGTATAGGAATGCTTGTGATTTTTGCACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCCTACCAGCTTAAGGAGTTTTGGGGCTGAGACTATGGGGTTTTCTAAATATAGAATCGTGTCATCAGCAAACAGTGACAATTTGACTTCCTCTCTTCCTATTTGAATACCTTTATTTCTTTCTCTTGCCTGATTGCACTGGCCAGAACTTCCAATACTATGTTGAATAGGAGTGGTGAGAGAGGGCATCCTTGCCTTGTGCCAGTTTTCAAAGGGAATGCTTCCAGCTTTTACCCATTCAGTATGATATTGGCTATGGCTCTGCAGTAAAGAGCTCTTGTTATTTTGAGATATGTTCCATCAATGCCTAGTTTATTGAGAGGTTTTAACATGAAGGGATGTTGAATTTTATGAAAGGCCATTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCATTGGTTCTGTTTATGTGATGGATTACATTTATTGATTTGCATATATTGAAATAGCCTTGCATCCCAGGGATGAAGCGACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTTGGTTTGCCAGTATTTTATTGACGATTTTCACATCGATATTAATCAGGGATATTGGCCTGAAATTTTCCTTTTTTGTTGTGTCTCTGCCAGGTTTTGGTAGCAGGATGATGTTGGCCTCATAATGTGAGTTAGAGAGGAGTCCCTCTTTTTCGACTGTTTGGAATTGTTTCAGAAGGAATGCTACCAGCTCCTCTTGTACCACTGGTAGAATTCAGCTGTGAATCTGTCTGGTCCTGGGCTTTTTTTGATTGGTAAGCTATTAATTACTCCTTCAATCTCAGAACTTGTTATCAGCCTATTCAGGGATTTGACTTTTTCCTGGTTTAGTCTTAGGAGGGTGTATGTGTCATGGAATTTATCCATTTCTTCTAGATTTTCTAGTTTACCATGCTAACTGACTTCAAACAACACTAGGAGGCTACAGTAACCAAAACACCATGATACTGGTGCCAAAACAGATATATAGACCAATGAAACAGGACAGAGACCTCAGAAATTACACCACGCATCTACAACCATCTGATCTTTGACAAACCTGACAAAAACAAACAATGTGGAAAGGATTCCCTGTTAAATAAATGGTGCTGGGAAAGCTGGTTAGTCATATGCAGAAAACTGAAACTGGACCCCTTCCTTACACCTTATACAAAAATTAACTCAAAATGTTTTAAAGACTTAAATGTAAAACCCAAAACCATAAAAACCCTAGAAAAAAACCTAGGCAGTACCATTCAGGACATAGGCATGGGCAAAGACTTCATGACTAAAATACCAAAAGCAATTGCAACAAAAGCCAAAATTGACAAATGGGATCTCATTAAACTAAAGAGCGTCTGCACAGCAAAATAAACTATCATCAGCGTGAACAGGCAACCTACAGAATGGGAGAAAATTTTTGCAATCTACCCATCTGACAAAGGGCTAATGTCTAGAATCTACAAGGAAATTAAACAAATTTACAAGAAAAAAACAATCCCATCAAAAAGTGGACACAAAATATGAACAGACACTTCTCAAAAGAAGACATTTATGTGGCCAACAAACAAATAAAAAAAACTCATCACCACTGATCACTAGAGAAATGCAAATCAAAACCACAATGAGATATCATTTCATGCCAGTCAGAATGGCGATTATTAAAAAGTCAGGAAACAATAGATGCTGACAAGACTGTAAAGAAATAGGAACACTTTTATACTGTTAGTGGGAGTGTAAATTAGTTCAACCATTGTGGAAGACAGTGTGGCGATTCCTCAGGATCTAGGATCAGAAATACAATTTGACCCAGCAATCCCATTACTGGGTATATACCCAAAGGAATATAAATCATTCTACTATAAAGACACTTGCACACATAATGTTTATTGCAGCACTATTTACAATAGCAAAGACTTGGAACCAACCCAAATGCCCAACAATGTTAGACTGGCTAAAGAAAGTGTGGCACATATACACCATGGAATACTATGCAGCCATGAAAAAGAATGAGATCATGTCCTTTGCAGGGACATGGATGAAGCTGGAAGCCATCATTCTCAGCAAACTAACACAGGAAAAGAAAACCAAACACCACATGTTCTTACTCGTAAGTGGGAGTTGAACAATGAGAACACATGGACACATCAAGGGGAACAATGCACACCAGGGCCTGTTGAGGGGTAGAGGGCAAGGGGATGAAGGGCATTAGAACAAATACCTAATGCGTGCGGGGCTTAAAACCTAGATGACGGGTTGATAGGTGCAGCAAACCACCATGGTTACATGTATACCTATGTAACAAAACTGCACATTCTGCACATGATCCCAGAACATGAAGTAAAATAAAAATAAATAAATAAATAAATAATCTAAATATAATGAATACTTTTCAGTGAAAATTATCAAAATTGGATCAAGTTGAAACAGACAACTTGAATAGACCAGTCATATTTAATTAATTGAACCTTCGTTAACAGCAATGATAATTTAGCCCATCCTTATCCCAGAAACAACAGGCTCATAAGGTTTTATCAGCAAGTTTACTAGCCTTCTAAGATCAGATCTTCCATGTGTTACAAACTGCCCTGGAGAACAGAAAAAGAGAAAATGCTAGCCATAATAAAGCTAACATAACACTGAGGCTAAAAGCAGACAAGCACATTGTATAAACAATTAAATTATAGTACACTGTAACTTATGATTATACACAATCCCAAGTAAAATATTGGCAAATTCAATTAAGTAGTATTTAAAAATACCTTATGACAAATTATAGTATTTGCTGGAAAACATGAGAGAAAACATCAATCTAATTTACATGTTAGTAGATTATATTAGATATAATCATAATCACAAAAGAACATAAGAAAATATCTAATGTCCATGTAGAAGAAAACTCAATACCATAAACATTTTAATTATATCTGAATGAATCAATAAATTTAATGCAATAGTAATCAGACCTTTATTTATCATGAAACTTGTCAAAATGTTTCCAATATGCATTTAGAAGAGTATAAGTAGCTAATATAAATTGAACTGTAGAATAAATCTAACAAAAATTATTTAATGGCTCAACTACAATACAATTTATTTTCTTTCTTTCTCTCTCTCTGTCTCTCTCTCTCTCTCTCTCTCTTTCTTTTGATGGAGTCTCACTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCCATCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCGATTCCCCTGCCTCAGCCTCGTGAGTGGCGGGGATTGAAGGTGCATGCCACCATGCCCAGCTAATTTTTTTGTATTTTTAGTAGGGACAGGGTTTCACCATGTTGCGCAGGCTGGTATCAAACTCCTGAGCTCAGGTTATCCGCCTGCCTCAGCCTCCCAAACTGCTGGGATTACAGGCATGAGCCACCATGCCCGGCCAATACAATATAATTTCTTGCTCATTAAACTAATATATCAGTTTATCTTCCCATGATAATCTAGGAAACTGAATTCCATCCGTCTTTTGGCCGGCTGTCTTCTAAGGCATCTACCTATCAGAAGGGAAAAGAGGATATAGAGAGACTCACCTACTTCCTAATATCATGACTTAGAAATGGCACATTATTTCTTCTGCATATATTCCATTGACTAGGAAGCAATCTTATGTCATTGTGAATGGAGTATAGCTCTGTGCTCAGAAAGAAAAAGTAATAAATTTTGGTAAAAAGCGGCTGGGTGCGGGGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAACGTGGGCAGATCATGAGGTCAGGAGTTCGAGACCAGCCTGGCCAATATGGTGAGACCCCATCTCTACTAAAAATACAAAAATTAGCTGGGCATGGTGGTGGGCGCCTGTAGTCCCTGCTACTTGGGAGACTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCGGAGATTGCAGTGAGCCAAGATGGCGCCCCTGCACTCTAGCCTGGGCCACACAGTGAGACTCCATCTCAAAAATTAATTAATTAATTAATTAATTAATTAATTTTGGTAAAAAGCTAGCAGTTTCTGTCACAAATAGTAAGCTCCCAGAAGAGCCAAGACAATTTTGAAAAAAATAAATAAGATGAAGAACCTGTTCTAGAATTTATGAAGGCTTATTATGAAGTTCTAGTAACTGCTAGTAACTAGACTATGTGTGAGAAGTATACAAAGAGATTAATTGAAAACTAGAATACTTCAAAGTGCATACACGCATAATATATATACATATGCGCACACACACACATATACACACAAACATAAATACAAACACACACATATCTGCTATTCGAGAGAGAAGGAATAACAAATGAATACGGAAAGAAGGAACCAGAAAGTAGTTCATGTTGGAACAATATGCTTGAGAAATGCAGAAAGAAAAAAACTCATCACCAACGACTTAGGTCACTCTCTTAGGTCTTACACAAAAATAAACTCAGATGTATGAAAGAGTACATCTTTCATGTACTCTTGACAAATACTTGAGATTATTAGAAGAATATGAAGGAATGTGCATTTATGACTTCTGAAAAGGAAAGTGCTTTCTAAACAGGACACACACACCAAATACACAATCACCAAGGAAAAGGTTGTTTGACCACAACAAAACTTAAACTTGAATACAATAGAAGAAAATTAGAGATTGACAAAATTAATAACTAGCAGCAAACAAATATCTAAAATACATAATGAACTCCTGCAAATAGGTATGACAAAAAAAAATCAACTGAGTACAAAAAGCTATTTCCAGAAGTCTAAGTGGCCATTCAACATATAAGACGACGCTCAAATTCTATGAAAAACAAGACAACAGACAACACAAATTCTAATACTGAGATACCCTACACACTCCATGTTTGTAAATAATTTGGCTCTGAGAAGCTGCAAATTGTTTTCTCTGTGTTCCTGTTCCACCCTCAACTTTCAAAGGCCTTGTGCACCCAAGCAGTAAAGGAGACCCCCTCCATTATCTTACCCTTCCCCCATCCATAGACTGCCATAGCTTTTTGCTCAGTGCAGTGCTTGAGATATGGGCAGGAGGAACTCTAGATTTCCTGCTCCAGCCTCAGTATTAGGTACTATAGATCTGGCCCTTGAGATGGGGCTTCCTCAACATGTTTTTCTCCCTACATACCAGCCAATTCCTACCTTGTATCTGTTGAGAGGTTCTGGACCTGTGAGAGCGTCCTCTCCCCCGCCGTGGTGAGAGCCTGTCTCTGCTTTGTATCCGTGCTGGGTCCTTGTTGCAAATCTCAGCTGCAAATTATCTTTGCTTGGGAATGGGAACTGGAAGCTTCCTGCCCCACCTGCAGTGGTAGCAGGCTGTTGCTTTTTACCAGGTGCAAGGCTTTTATCATAGAGCGACGTGGTTTCCTTCCTCTCCCTCCACAAAGTGGTTTTTTGCTTCTACCCATAACTTAGCAGCAGAAATTCACTTGGAACAGGAGTAAAGGTTGGGGGAAGGGGTGGTTGGTGGTTTACAGATTGCCCCTCATTAGCTGCTGATTTTTGCTTTAACTCCTCCCCAAGATGCAATAACAGCTTGTTTTGTGGGGCTGACAGGGATTCCTGTCCTTCTACCAAGGTTTCTAGATTTGCCCTTTGGAAAAAATGTTCTGAGACATGGGTAGATTTTGTGGCCTGTGAGCTACTGGGGGTCTTTCAGGTCTCTTGTTTGCATATGTATGTATATGTGTATATATATATATATATATATATATATATATATATATATATATAACTTTAAGTTCTGGGCTACATGTGCTGAACATGCAGGTTTGTTACATAGATATACATGTGTCATGGTGGTTTGCTGCACCCATCAACCCATCATCTAGGTTTTAAGCCCCACATGCATTAGGTATTTGTCCTAATGCTCTCCCTTCCCTTTCCTCTCACCCCCCAACAGGACCCAGTGTGTGATGTTCCCCTCCCTGTGACCATGTGTTCTCCTTGTTCAACTCCCACTTATGAGCGAGAACATGAGGTGTTTGGTTTTCTGTTCCTGTGTTATTTTGCTGAGGATGATGGCTTCCAGCTTCATCCATGTCCCTGCAAAGGACACGATCTCATTCTTTTTCATGGCTGCATAGTATTCCATGGTGTATATATGCCACATTTTTCTTTATGCAGTCTATCATTGATGGGGATTTGGGTTGGTTCCAACTCTTTGCTATTGTAATTTTTTTTAATGAATACTAGGTGAAGCCTGTAAAAAAAGAGTTGACAAATGTGCTGGGGTCCTGGTAATTGTAAACAAACACGCAAGCTGTGGGTCCACACTCAGCCATTAAAAATTTAACATTTCAGCTGCTTTCTCCCTACCTGCTTTTATAGTAGCCATGTCTTTCTCTAATACTCTACCAATTCTGAAACTGTTCATGGGTCCCTTTTATCCCTGGAGAAGGCTTTTACCCTTTGGACTTTAGTTTACCTAGTTACCTGTGAACTCAGCTCTTTGATAGACCCAAGAAAAGTTATAATTTTATAGATTATCTGACTTTGTTTCATTATTAGGAAAGTAGCAACATTCTCTTGAGAATTTATGCATTGTAAGTGAAAGAAAAATCCAGGAAATCTTATAGAGAATGGCAATATGGTTATAGATGAGAATGTGGAAAAGATGAATTTTGAAATACTTCCTATCATAGTACAAATTGCTACAATGATTTTAGAAAAAAGTATATCTATACACATACACGGAGATCATATATATGGAAATACGTGTGTGTATTTTTCCTGATGACTCTGCATAATAAACATAAATAAATTCTTAAAGATGGAAACAATAAATAAATGTCACTTTAAAATGACATTCGATTAAAGTGACATTTTAAAAAGACAATGTAAAGCTTTTTCCAGGCCAAACTATGGTGATTATCCTATATTAAGATTTTAATTCTTCAAAGAAAGATAGTAAAAAGTTCAATTTCTTTCACTAGGGAAAGAAAATTTTCTTTCATCCCACAACAAATTAGTAAAGAGAGCAATTATTTCTGCCAGAAATAACAAAGATCCCATTAAATTGTCTTAGATAGATCAATTCCTAAAACAGATTATTTATTCAGGTTCTTAAGCTAAATATTATAGAGTCATTAAATTGGGTGTTCAAGGATGTATTTATTGAAATTAAGAGTGGTGTATGTGTAGGTGTTGGTCTGGGTGCAATCTGGGGACAGAAACTACATAGTAATTAAATGAAGTAAGTTTAATATACAGAACTATTGAATAGTGACAGGAGAATAACTATAAAGATGGACTGAGAGCTCAAGAGGGCTTCCTAGGGCTGAGGGAGAATATCCAAAGAAGAATAAACATGAGGAGATAAGGTATTGACAATTGGATAAGAAGTGGTTGAAACCCACCGAATGGCAAAGAAGTCTGAATGGCAAGCTGTGGACACCAGTACTAGAGTGCACTCCTTTTGCAACAGGACGGCCAAAGGAAACAGAGCTTCGAGGAAAGGGATGTAGCTATCTGGGGCTCCCAGATATACTACTGCTACCCAAGTCAAGAGCTAGAGGAAACACACAGTGAATCCTGCACACTCTAGGTACTTTGCATTGGAGAAAACAATTTACTCAGTGGGGAAAAATACATTCTATAGCAACTCAGCAAATGAACTATTCTGATACCTGGATGGCATCAGATGCCTGCAGTGTCTCTACTGTCCTCTCTGCTGAAACAGCATAACATCATGCCAGCTGGCAAAGGAAAGTACTTAAAGGATTCAGATCCATTTTTATAGAGCAGGCTATGCAGAGTGAATTTAGGGCTGAGAGACAGTAAATTGATAACAGGCACAGGGCATCACAAATAAATGATGGAACAGAGTCTGCAAGTGGGGACGGAAGGAGAGCATGGGAGTAATACAATGCTGACTTGGGAACACTCAGACTCTTTGCACTCATTTGGAACATTGGAGTATTAGGCTACGTTTTTTTGTTGTTTGCAGGATATTTCTTTTTCTTAAGAACTTCATATTAATTTTATCTTCTTTCTTTTTCATTAAACAAG
Seq C2 exon
ACAAGATGAGGAAGAGAAAGATCAGTGTGTGTCAACAAACTTGGGCCTTATTATGCAAGAACTTTCTTAAAAAATGGAGAATGAAAAGAGAGTCCTTAATG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000141338:ENST00000269080:1
Average complexity
IR
Mappability confidence:
NA
Protein Impact
5' UTR
No structure available
Features
Disorder rate (Iupred):
C1=NA A=NA C2=0.000
Domain overlap (PFAM):
C1:
NA
A:
NA
C2:
PF126982=ABC2_membrane_3=PU(1.0=12.5)
Main Inclusion Isoform:
NA
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Other assemblies
Conservation
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains
- Pre-implantation embryo development