Special

ENSG00000146197 @ hg19

Biotype
protein_coding
Gene Symbol
SCUBE3
Description
signal peptide, CUB domain, EGF-like 3 [Source:HGNC Symbol;Acc:13655]
Coordinates
chr6:35182190-35220856:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
48
chr6:35203223-35203270
+
27.76
57.73
0
Exon Skipping
162
chr6:35211371-35211532
+
88.38
24.18
0
Intron Retention
276
chr6:35209044-35209319
+
29.99
100
0
Intron Retention
146
chr6:35209437-35209582
+
23.17
73.38
0
Intron Retention
293
chr6:35209688-35209980
+
23.53
89.79
0
Intron Retention
301
chr6:35210098-35210398
+
34.96
89.82
0
Intron Retention
240
chr6:35210558-35210797
+
27.93
93.58
0
Intron Retention
357
chr6:35211014-35211370
+
46.12
97.96
0
Intron Retention
207
chr6:35211533-35211739
+
19.57
60.71
0
Intron Retention
519
chr6:35211908-35212426
+
11.95
55.24
0
Intron Retention
416
chr6:35212589-35213004
+
23.68
87.51
0
Intron Retention
518
chr6:35213203-35213720
+
35.55
100
0
Intron Retention
911
chr6:35195480-35196390
+
14.46
45.78
0
Intron Retention
109
chr6:35213874-35213982
+
16.53
100
0
Intron Retention
2270
chr6:35214063-35216332
+
15.41
80.65
0
Intron Retention
2985
chr6:35196517-35199501
+
11.44
28.26
0
Intron Retention
990
chr6:35199637-35200626
+
12.97
81.44
0
Intron Retention
209
chr6:35200753-35200961
+
12.09
100
0
Intron Retention
4600
chr6:35201079-35205678
+
22.36
94.59
0
Intron Retention
1733
chr6:35205796-35207528
+
29.17
94.18
0
Intron Retention
499
chr6:35207652-35208150
+
35.41
100
0
Intron Retention
650
chr6:35208268-35208917
+
30.5
100
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000038677 Scube3 1-to-1
Mouse mm9 ENSMUSG00000038677 Scube3 1-to-1
Rat rn6 ENSRNOG00000000500 Scube3 1-to-1
Cow bosTau6 ENSBTAG00000009226 SCUBE3 1-to-1
Chicken galGal4 ENSGALG00000002675 SCUBE3 1-to-1
Chicken galGal3 ENSGALG00000002675 SCUBE3 1-to-1
Zebrafish danRer10 ENSDARG00000011490 scube3 1-to-1
Fruitfly dm6 FBgn0052373 CG32373 7-to-1