Special

ENSMUSG00000038677 @ mm9

Biotype
protein_coding
Gene Symbol
Scube3
Description
signal peptide, CUB domain, EGF-like 3 [Source:MGI Symbol;Acc:MGI:3045253]
Coordinates
chr17:28279261-28311797:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
48
chr17:28295826-28295873
+
29.7
76.33
0
Exon Skipping
162
chr17:28302932-28303093
+
70
57.89
0
Intron Retention
187
chr17:28300803-28300989
+
13.1
85.71
0
Intron Retention
136
chr17:28301107-28301242
+
12.64
61.04
0
Intron Retention
271
chr17:28301348-28301618
+
12.68
85.82
0
Intron Retention
272
chr17:28301736-28302007
+
10.11
70.5
0
Intron Retention
205
chr17:28302167-28302371
+
11.23
76.42
0
Intron Retention
344
chr17:28302588-28302931
+
18.88
68.16
0
Intron Retention
208
chr17:28303094-28303301
+
10.7
62.43
0
Intron Retention
501
chr17:28303470-28303970
+
9.03
53.51
0
Intron Retention
421
chr17:28304653-28305073
+
13.09
74.63
0
Intron Retention
2734
chr17:28305407-28308140
+
17.27
100
0
Intron Retention
735
chr17:28292972-28293706
+
8.81
49.89
0
Intron Retention
185
chr17:28293833-28294017
+
7.35
58.02
0
Intron Retention
3622
chr17:28294135-28297756
+
9.2
62.89
0
Intron Retention
1387
chr17:28297874-28299260
+
10.18
58.58
0
Intron Retention
515
chr17:28299384-28299898
+
15.2
76.29
0
Intron Retention
661
chr17:28300016-28300676
+
11.35
70.83
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000146197 SCUBE3 1-to-1
Human hg19 ENSG00000146197 SCUBE3 1-to-1
Rat rn6 ENSRNOG00000000500 Scube3 1-to-1
Cow bosTau6 ENSBTAG00000009226 SCUBE3 1-to-1
Chicken galGal4 ENSGALG00000002675 SCUBE3 1-to-1
Chicken galGal3 ENSGALG00000002675 SCUBE3 1-to-1
Zebrafish danRer10 ENSDARG00000011490 scube3 1-to-1
Fruitfly dm6 FBgn0052373 CG32373 8-to-1