Special

ENSG00000146197 @ hg38

Biotype
protein_coding
Gene Symbol
SCUBE3
Description
signal peptide, CUB domain and EGF like domain containing 3 [Source:HGNC Symbol;Acc:HGNC:13655]
Coordinates
chr6:35214419-35253079:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
48
chr6:35235446-35235493
+
28.28
57.73
0
Exon Skipping
162
chr6:35243594-35243755
+
89.15
24.18
0
Exon Skipping
73
chr6:35218126-35218198
+
5.17
24.75
0
Exon Skipping
123
chr6:35233691-35233813
+
2.34
15.03
0
Exon Skipping
148
chr6:35233914-35234061
+
2.66
15.83
0
Intron Retention
13076
chr6:35214504-35227579
+
8.51
29.58
0
Intron Retention
276
chr6:35241267-35241542
+
32.23
100
0
Intron Retention
146
chr6:35241660-35241805
+
29.61
100
0
Intron Retention
293
chr6:35241911-35242203
+
27.51
96.17
0
Intron Retention
301
chr6:35242321-35242621
+
32.62
89.82
0
Intron Retention
240
chr6:35242781-35243020
+
26.71
93.58
0
Intron Retention
357
chr6:35243237-35243593
+
43.79
97.96
0
Intron Retention
207
chr6:35243756-35243962
+
25.89
100
0
Intron Retention
519
chr6:35244131-35244649
+
13.87
100
0
Intron Retention
416
chr6:35244812-35245227
+
25.75
100
0
Intron Retention
518
chr6:35245426-35245943
+
34.64
100
0
Intron Retention
911
chr6:35227703-35228613
+
13.5
45.78
0
Intron Retention
109
chr6:35246097-35246205
+
25.75
100
0
Intron Retention
2270
chr6:35246286-35248555
+
14.87
100
0
Intron Retention
2985
chr6:35228740-35231724
+
19.4
100
0
Intron Retention
990
chr6:35231860-35232849
+
16.37
100
0
Intron Retention
209
chr6:35232976-35233184
+
13.93
100
0
Intron Retention
4600
chr6:35233302-35237901
+
27.62
100
0
Intron Retention
1733
chr6:35238019-35239751
+
24.91
94.89
0
Intron Retention
499
chr6:35239875-35240373
+
39.95
100
0
Intron Retention
650
chr6:35240491-35241140
+
37.02
100
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000038677 Scube3 1-to-1
Mouse mm9 ENSMUSG00000038677 Scube3 1-to-1
Rat rn6 ENSRNOG00000000500 Scube3 1-to-1
Cow bosTau6 ENSBTAG00000009226 SCUBE3 1-to-1
Chicken galGal4 ENSGALG00000002675 SCUBE3 1-to-1
Chicken galGal3 ENSGALG00000002675 SCUBE3 1-to-1
Zebrafish danRer10 ENSDARG00000011490 scube3 1-to-1
Fruitfly dm6 FBgn0052373 CG32373 7-to-1