Special

ENSG00000148356 @ hg38

Biotype
protein_coding
Gene Symbol
LRSAM1
Description
leucine rich repeat and sterile alpha motif containing 1 [Source:HGNC Symbol;Acc:HGNC:25135]
Coordinates
chr9:127451486-127503501:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
81
chr9:127491215-127491295
+
97.71
27.1
0
Exon Skipping
99
chr9:127495320-127495418
+
95.88
33.99
0
Exon Skipping
91
chr9:127467740-127467830
+
94.93
27.18
0
Exon Skipping
412
chr9:127461613-127462024
+
1.74
100
0
Exon Skipping
134
chr9:127501010-127501143
+
99.97
1.8
2
Intron Retention
259
chr9:127451670-127451928
+
41.34
81.23
0
Intron Retention
1840
chr9:127485836-127487675
+
7.65
53.21
0
Intron Retention
2411
chr9:127452085-127454495
+
10.43
38.98
0
Intron Retention
1506
chr9:127491296-127492801
+
8.15
47.06
0
Intron Retention
2422
chr9:127492898-127495319
+
16.67
58.46
0
Intron Retention
545
chr9:127495419-127495963
+
12.12
59.41
0
Intron Retention
1157
chr9:127496096-127497252
+
9.1
52.38
0
Intron Retention
3675
chr9:127497335-127501009
+
12.82
67.85
0
Intron Retention
1630
chr9:127501144-127502773
+
5.31
62.2
0
Intron Retention
2101
chr9:127459072-127461172
+
10.98
43.73
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000026792 Lrsam1 1-to-1
Mouse mm9 ENSMUSG00000026792 Lrsam1 1-to-1
Rat rn6 ENSRNOG00000022312 Lrsam1 1-to-1
Cow bosTau6 ENSBTAG00000012844 LRSAM1 1-to-1
Chicken galGal4 ENSGALG00000008819 LRSAM1 1-to-1
Chicken galGal3 ENSGALG00000008819 LRSAM1 1-to-1
Zebrafish danRer10 ENSDARG00000060683 lrsam1 1-to-1