Special

ENSG00000148356 @ hg19

Biotype
protein_coding
Gene Symbol
LRSAM1
Description
leucine rich repeat and sterile alpha motif containing 1 [Source:HGNC Symbol;Acc:25135]
Coordinates
chr9:130213784-130265778:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
+
91.81
28.61
0
Alternative 5'ss
5
chr9:130248115-130248119
+
8.19
28.61
0
Exon Skipping
81
chr9:130253494-130253574
+
97.31
27.1
0
Exon Skipping
99
chr9:130257599-130257697
+
96.07
34.53
0
Exon Skipping
91
chr9:130230019-130230109
+
94.55
27.18
0
Exon Skipping
134
chr9:130263289-130263422
+
99.95
1.17
2
Intron Retention
259
chr9:130213949-130214207
+
40.91
67.8
0
Intron Retention
2411
chr9:130214364-130216774
+
10.91
38.98
0
Intron Retention
1506
chr9:130253575-130255080
+
8.42
47.06
0
Intron Retention
2422
chr9:130255177-130257598
+
17.51
53.19
0
Intron Retention
545
chr9:130257698-130258242
+
12.76
59.41
0
Intron Retention
1157
chr9:130258375-130259531
+
9.32
52.38
0
Intron Retention
3675
chr9:130259614-130263288
+
13.43
66.74
0
Intron Retention
1630
chr9:130263423-130265052
+
5.63
62.2
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000026792 Lrsam1 1-to-1
Mouse mm9 ENSMUSG00000026792 Lrsam1 1-to-1
Rat rn6 ENSRNOG00000022312 Lrsam1 1-to-1
Cow bosTau6 ENSBTAG00000012844 LRSAM1 1-to-1
Chicken galGal4 ENSGALG00000008819 LRSAM1 1-to-1
Chicken galGal3 ENSGALG00000008819 LRSAM1 1-to-1
Zebrafish danRer10 ENSDARG00000060683 lrsam1 1-to-1