Special

ENSG00000165684 @ hg19

Biotype
protein_coding
Gene Symbol
SNAPC4
Description
small nuclear RNA activating complex, polypeptide 4, 190kDa [Source:HGNC Symbol;Acc:11137]
Coordinates
chr9:139270029-139293249:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Intron Retention
849
chr9:139276789-139277637
-
11.99
41.73
0
Intron Retention
1061
chr9:139270934-139271994
-
12.11
42.58
0
Intron Retention
179
chr9:139289876-139290054
-
16.13
60.85
0
Intron Retention
419
chr9:139289331-139289749
-
18.13
55.73
0
Intron Retention
1471
chr9:139287230-139288700
-
11.38
30.43
0
Intron Retention
415
chr9:139286559-139286973
-
16.23
50.97
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000036281 Snapc4 1-to-1
Mouse mm9 ENSMUSG00000036281 Snapc4 1-to-1
Rat rn6 ENSRNOG00000018845 Snapc4 1-to-1
Cow bosTau6 ENSBTAG00000000054 SNAPC4 1-to-1
Chicken galGal4 ENSGALG00000001910 SNAPC4 1-to-1
Chicken galGal3 ENSGALG00000001910 SNAPC4 1-to-1
Zebrafish danRer10 ENSDARG00000067673 snapc4 1-to-1
Fruitfly dm6 FBgn0037540 Pbp95 1-to-1