Special

ENSG00000179869 @ hg19

Biotype
protein_coding
Gene Symbol
ABCA13
Description
ATP-binding cassette, sub-family A (ABC1), member 13 [Source:HGNC Symbol;Acc:14638]
Coordinates
chr7:48211055-48687092:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
+
10.12
23.36
0
Alternative 5'ss
93
chr7:48547553-48547645
+
89.88
23.36
0
Exon Skipping
93
chr7:48506550-48506642
+
91.58
17.18
0
Exon Skipping
151
chr7:48619820-48619970
+
96.34
13.74
0
Exon Skipping
178
chr7:48547468-48547645
+
93.31
21.92
0
Exon Skipping
70
chr7:48413944-48414013
+
96.12
12.38
0
Intron Retention
1422
chr7:48319518-48320939
+
53.39
31.63
0
Intron Retention
1849
chr7:48412095-48413943
+
11.91
19.17
0
Intron Retention
2700
chr7:48428818-48431517
+
13.69
93.86
0
Intron Retention
16990
chr7:48528942-48545931
+
6.88
22.19
0
Intron Retention
5089
chr7:48273749-48278837
+
4.25
20
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000004668 Abca13 1-to-1
Mouse mm9 ENSMUSG00000004668 Abca13 1-to-1
Rat rn6 ENSRNOG00000025645 Abca13 1-to-1
Cow bosTau6 ENSBTAG00000003531 ABCA13 1-to-1
Chicken galGal4 ENSGALG00000013079 ABCA13 1-to-1
Zebrafish danRer10 ENSDARG00000074749 abca12 2-to-1
Fruitfly dm6 FBgn0028539 CG31731 6-to-2
Fruitfly dm6 FBgn0083956 CG34120 6-to-2