Special

FBgn0083956 @ dm6

Biotype
protein_coding
Gene Symbol
CG34120
Description
This gene is referred to in FlyBase by the symbol DmelCG34120 (FBgn0083956). It is a protein_coding_gene from Dmel. It has 5 annotated transcripts and 5 polypeptides (4 unique). Gene sequence location is X:21123634..21140951. Its molecular function is described by: lipid transporter activity; ATPase activity; ATP binding; ATPase-coupled transmembrane transporter activity. It is involved in the biological process described with: lipid transport; transmembrane transport. 17 alleles are reported. No phenotypic data is available. The phenotypic class of alleles includes: viable. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of very low expression. Peak expression observed at stages throughout the pupal period, in adult male stages.
Coordinates
chrX:21123634-21140951:+
Assembly
dm6

GENOMIC BROWSER[edit]

EXPRESSION VALUES[edit]

SPECIAL DATASETS

  • Neural diversity
  • Neurogenesis
  • Neuronal activity
  • Splicing factor regulation (brain)
  • Splicing factor regulation (SL2)

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
78.39
49.48
0
Alternative 3'ss
3
chrX:21136021-21136023
+
21.61
49.48
0
Exon Skipping
48
chrX:21133548-21133595
+
16.72
71.59
0
Intron Retention
57
chrX:21133271-21133327
+
12.65
100
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000064687 ABCA7 2-to-6
Human hg38 ENSG00000107331 ABCA2 2-to-6
Human hg38 ENSG00000144452 ABCA12 2-to-6
Human hg38 ENSG00000165029 ABCA1 2-to-6
Human hg38 ENSG00000179869 ABCA13 2-to-6
Human hg19 ENSG00000064687 ABCA7 2-to-6
Human hg19 ENSG00000107331 ABCA2 2-to-6
Human hg19 ENSG00000144452 ABCA12 2-to-6
Human hg19 ENSG00000165029 ABCA1 2-to-6
Human hg19 ENSG00000179869 ABCA13 2-to-6
Mouse mm10 ENSMUSG00000004668 Abca13 2-to-6
Mouse mm10 ENSMUSG00000015243 Abca1 2-to-6
Mouse mm10 ENSMUSG00000026944 Abca2 2-to-6
Mouse mm10 ENSMUSG00000028125 Abca4 2-to-6
Mouse mm10 ENSMUSG00000035722 Abca7 2-to-6
Mouse mm9 ENSMUSG00000004668 Abca13 2-to-6
Mouse mm9 ENSMUSG00000015243 Abca1 2-to-6
Mouse mm9 ENSMUSG00000026944 Abca2 2-to-6
Mouse mm9 ENSMUSG00000028125 Abca4 2-to-6
Mouse mm9 ENSMUSG00000035722 Abca7 2-to-6
Rat rn6 ENSRNOG00000004040 Abca8 1-to-5
Rat rn6 ENSRNOG00000004147 Abca8a 1-to-5
Rat rn6 ENSRNOG00000004378 Abca5 1-to-5
Rat rn6 ENSRNOG00000046890 Abca6 1-to-5
Rat rn6 ENSRNOG00000059326 Abca9 1-to-5
Cow bosTau6 ENSBTAG00000003472 ABCA12 2-to-6
Cow bosTau6 ENSBTAG00000003531 ABCA13 2-to-6
Cow bosTau6 ENSBTAG00000018010 ABCA4 2-to-6
Cow bosTau6 ENSBTAG00000020661 ABCA1 2-to-6
Cow bosTau6 ENSBTAG00000020766 ABCA7 2-to-6
Chicken galGal4 ENSGALG00000002453 ABCA7 2-to-6
Chicken galGal4 ENSGALG00000003553 ABCA12 2-to-6
Chicken galGal4 ENSGALG00000013079 ABCA13 2-to-6
Chicken galGal4 ENSGALG00000015433 ABCA1 2-to-6
Chicken galGal3 ENSGALG00000002453 ABCA7 2-to-6
Chicken galGal3 ENSGALG00000003553 E1C7T0_CHICK 2-to-6
Chicken galGal3 ENSGALG00000013079 F1NT47_CHICK 2-to-6
Chicken galGal3 ENSGALG00000015433 E1C619_CHICK 2-to-6
Zebrafish danRer10 ENSDARG00000057169 abca4a 2-to-8
Zebrafish danRer10 ENSDARG00000062661 abca4b 2-to-8
Zebrafish danRer10 ENSDARG00000074221 ABCA7 2-to-8
Zebrafish danRer10 ENSDARG00000074635 abca1a 2-to-8
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