Special

ENSMUSG00000035722 @ mm10

Biotype
protein_coding
Gene Symbol
Abca7
Description
ATP-binding cassette, sub-family A (ABC1), member 7 [Source:MGI Symbol;Acc:MGI:1351646]
Coordinates
chr10:79996494-80015572:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
106
chr10:80007324-80007429
+
21.58
37.18
0
Alternative 3'ss
130
chr10:80007300-80007429
+
77.13
35.77
0
Alternative 5'ss
0
NA
+
12.46
29.18
0
Alternative 5'ss
37
chr10:79998488-79998524
+
87.54
29.18
0
Exon Skipping
93
chr10:80014468-80014560
+
98.66
100
0
Exon Skipping
130
chr10:80011713-80011842
+
96.77
17.65
0
Exon Skipping
241
chr10:80014947-80015187
+
98.64
100
0
Exon Skipping
178
chr10:80008663-80008840
+
95.57
45.98
0
Exon Skipping
121
chr10:80011915-80012035
+
97.56
83.95
0
Intron Retention
315
chr10:80001720-80002034
+
18.13
43.4
0
Intron Retention
295
chr10:80002212-80002506
+
20.58
63.93
0
Intron Retention
166
chr10:80004553-80004718
+
15.56
43.69
0
Intron Retention
95
chr10:80007229-80007323
+
71.17
34.48
0
Intron Retention
91
chr10:80008572-80008662
+
12.94
40.8
0
Intron Retention
314
chr10:80011399-80011712
+
19.46
45.59
0
Intron Retention
72
chr10:80011843-80011914
+
30.34
66.53
0
Intron Retention
88
chr10:80012036-80012123
+
17.46
39.79
0
Intron Retention
200
chr10:80013419-80013618
+
16.62
44.83
0
Intron Retention
135
chr10:80014333-80014467
+
13.23
38.18
0
Intron Retention
118
chr10:80015188-80015305
+
7
95.47
0
Intron Retention
232
chr10:79998525-79998756
+
10.23
90.33
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000064687 ABCA7 1-to-1
Human hg19 ENSG00000064687 ABCA7 1-to-1
Rat rn6 ENSRNOG00000012939 Abca7 1-to-1
Chicken galGal4 ENSGALG00000002453 ABCA7 1-to-1
Chicken galGal3 ENSGALG00000002453 ABCA7 1-to-1
Zebrafish danRer10 ENSDARG00000074221 ABCA7 1-to-1
Fruitfly dm6 FBgn0028539 CG31731 6-to-2
Fruitfly dm6 FBgn0083956 CG34120 6-to-2