Special

ENSMUSG00000035722 @ mm9

Biotype
protein_coding
Gene Symbol
Abca7
Description
ATP-binding cassette, sub-family A (ABC1), member 7 [Source:MGI Symbol;Acc:MGI:1351646]
Coordinates
chr10:79459239-79478317:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
22.36
40.59
0
Alternative 3'ss
24
chr10:79470045-79470068
+
77.64
40.59
0
Alternative 5'ss
0
NA
+
12.67
29.79
0
Alternative 5'ss
37
chr10:79461233-79461269
+
87.33
29.79
0
Exon Skipping
93
chr10:79477213-79477305
+
98.65
100
0
Exon Skipping
152
chr10:79470045-79470196
+
98.53
28.28
0
Exon Skipping
178
chr10:79471408-79471585
+
95.82
46.72
0
Intron Retention
315
chr10:79464465-79464779
+
17.79
43.4
0
Intron Retention
295
chr10:79464957-79465251
+
20.23
63.93
0
Intron Retention
166
chr10:79467298-79467463
+
15.38
43.69
0
Intron Retention
95
chr10:79469974-79470068
+
72.08
34.32
0
Intron Retention
314
chr10:79474144-79474457
+
19.44
45.59
0
Intron Retention
72
chr10:79474588-79474659
+
30.64
65.37
0
Intron Retention
88
chr10:79474781-79474868
+
17.77
39.78
0
Intron Retention
200
chr10:79476164-79476363
+
16.41
43.19
0
Intron Retention
135
chr10:79477078-79477212
+
13.53
38.18
0
Intron Retention
232
chr10:79461270-79461501
+
10.54
90.33
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000064687 ABCA7 1-to-1
Human hg19 ENSG00000064687 ABCA7 1-to-1
Rat rn6 ENSRNOG00000012939 Abca7 1-to-1
Chicken galGal4 ENSGALG00000002453 ABCA7 1-to-1
Zebrafish danRer10 ENSDARG00000074221 ABCA7 1-to-1
Fruitfly dm6 FBgn0028539 CG31731 6-to-2
Fruitfly dm6 FBgn0083956 CG34120 6-to-2