Special

ENSMUSG00000028125 @ mm9

Biotype
protein_coding
Gene Symbol
Abca4
Description
ATP-binding cassette, sub-family A (ABC1), member 4 [Source:MGI Symbol;Acc:MGI:109424]
Coordinates
chr3:121747361-121882979:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
124
chr3:121860753-121860876
+
92.73
64.31
0
Exon Skipping
170
chr3:121850648-121850817
+
99.99
0.14
1
Exon Skipping
75
chr3:121850349-121850423
+
99.92
0.37
1
Exon Skipping
106
chr3:121850116-121850221
+
99.46
3.44
1
Exon Skipping
95
chr3:121844609-121844703
+
100
0
1
Exon Skipping
187
chr3:121841342-121841528
+
99.99
0.17
1
Exon Skipping
198
chr3:121790212-121790409
+
99.96
0.38
1
Exon Skipping
117
chr3:121789477-121789593
+
99.99
0.05
2
Exon Skipping
140
chr3:121758236-121758375
+
99.94
0.34
1
Exon Skipping
142
chr3:121757110-121757251
+
99.95
0.35
1
Exon Skipping
127
chr3:121751436-121751562
+
8.06
5.38
0
Intron Retention
561
chr3:121829179-121829739
+
12.02
25.66
0
Intron Retention
945
chr3:121858311-121859255
+
4.68
49.19
0
Intron Retention
2757
chr3:121873940-121876696
+
13.37
40.05
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000198691 ABCA4 1-to-1
Human hg19 ENSG00000198691 ABCA4 1-to-1
Rat rn6 ENSRNOG00000012892 Abca4 1-to-1
Chicken galGal4 ENSGALG00000005752 ABCA4 1-to-1
Zebrafish danRer10 ENSDARG00000062661 abca4b 1-to-1
Fruitfly dm6 FBgn0028539 CG31731 6-to-2
Fruitfly dm6 FBgn0083956 CG34120 6-to-2