Special

ENSG00000198691 @ hg38

Biotype
protein_coding
Gene Symbol
ABCA4
Description
ATP binding cassette subfamily A member 4 [Source:HGNC Symbol;Acc:HGNC:34]
Coordinates
chr1:93992835-94121132:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
222
chr1:94056601-94056822
-
77.33
64.92
0
Exon Skipping
184
chr1:94045754-94045937
-
2.38
13.93
0
Exon Skipping
142
chr1:94111438-94111579
-
90.6
8.98
1
Exon Skipping
140
chr1:94108577-94108716
-
99.98
0.08
1
Exon Skipping
117
chr1:94078590-94078706
-
74.67
99.66
2
Exon Skipping
198
chr1:94077690-94077887
-
99.56
0.31
1
Exon Skipping
125
chr1:94030996-94031120
-
93.34
31.17
0
Exon Skipping
99
chr1:94030428-94030526
-
96.66
16.98
0
Exon Skipping
187
chr1:94029445-94029631
-
99.99
0.06
1
Exon Skipping
95
chr1:94024954-94025048
-
100
0
1
Exon Skipping
106
chr1:94021846-94021951
-
100
0
1
Exon Skipping
75
chr1:94021640-94021714
-
98.03
15.79
1
Exon Skipping
170
chr1:94021240-94021409
-
95.7
19.35
1
Intron Retention
2174
chr1:94044745-94046918
-
11.35
41.94
0
Intron Retention
469
chr1:94030527-94030995
-
10.14
23.57
0
Intron Retention
332
chr1:94010930-94011261
-
12.86
26.44
0
Intron Retention
3448
chr1:94001993-94005440
-
18.09
46.63
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000028125 Abca4 1-to-1
Mouse mm9 ENSMUSG00000028125 Abca4 1-to-1
Rat rn6 ENSRNOG00000012892 Abca4 1-to-1
Chicken galGal4 ENSGALG00000005752 ABCA4 1-to-1
Chicken galGal3 ENSGALG00000005752 F1N8D7_CHICK 1-to-1
Zebrafish danRer10 ENSDARG00000057169 abca4a 1-to-2
Zebrafish danRer10 ENSDARG00000062661 abca4b 1-to-2
Fruitfly dm6 FBgn0028539 CG31731 6-to-2
Fruitfly dm6 FBgn0083956 CG34120 6-to-2