Special

ENSG00000198691 @ hg19

Biotype
protein_coding
Gene Symbol
ABCA4
Description
ATP-binding cassette, sub-family A (ABC1), member 4 [Source:HGNC Symbol;Acc:34]
Coordinates
chr1:94458393-94586688:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
222
chr1:94522157-94522378
-
75.29
66.28
0
Exon Skipping
142
chr1:94576994-94577135
-
89.76
13.88
1
Exon Skipping
140
chr1:94574133-94574272
-
100
0
1
Exon Skipping
117
chr1:94544146-94544262
-
98.34
4.99
2
Exon Skipping
198
chr1:94543246-94543443
-
98.33
5.27
1
Exon Skipping
125
chr1:94496552-94496676
-
95.12
25.37
0
Exon Skipping
99
chr1:94495984-94496082
-
97.7
12.37
0
Exon Skipping
187
chr1:94495001-94495187
-
99.98
0.09
1
Exon Skipping
95
chr1:94490510-94490604
-
100
0.03
1
Exon Skipping
106
chr1:94487402-94487507
-
100
0
1
Exon Skipping
75
chr1:94487196-94487270
-
98.22
15.79
1
Exon Skipping
170
chr1:94486796-94486965
-
97.55
19.35
1
Intron Retention
2174
chr1:94510301-94512474
-
12.01
38.88
0
Intron Retention
469
chr1:94496083-94496551
-
9.31
20.39
0
Intron Retention
332
chr1:94476486-94476817
-
12.48
26.44
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000028125 Abca4 1-to-1
Mouse mm9 ENSMUSG00000028125 Abca4 1-to-1
Rat rn6 ENSRNOG00000012892 Abca4 1-to-1
Chicken galGal4 ENSGALG00000005752 ABCA4 1-to-1
Zebrafish danRer10 ENSDARG00000062661 abca4b 1-to-1
Fruitfly dm6 FBgn0028539 CG31731 6-to-2
Fruitfly dm6 FBgn0083956 CG34120 6-to-2