Special

ENSRNOG00000012892 @ rn6

Biotype
protein_coding
Gene Symbol
Abca4
Description
ATP binding cassette subfamily A member 4 [Source:RGD Symbol;Acc:1309445]
Coordinates
chr2:225645568-225783287:+
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]



EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
+
83.5
40.28
0
Alternative 5'ss
240
chr2:225724417-225724656
+
16.5
40.28
0
Alternative 5'ss
0
NA
+
93.6
25.81
0
Alternative 5'ss
130
chr2:225745456-225745585
+
6.4
25.81
0
Exon Skipping
140
chr2:225655361-225655500
+
99.98
0.07
1
Exon Skipping
95
chr2:225745361-225745455
+
97.64
10.7
1
Exon Skipping
106
chr2:225751692-225751797
+
99.16
4.56
1
Exon Skipping
75
chr2:225751930-225752004
+
99.99
0.08
1
Exon Skipping
117
chr2:225690365-225690481
+
95.28
21.92
2
Exon Skipping
223
chr2:225709948-225710170
+
88.41
34.65
0
Exon Skipping
49
chr2:225737317-225737365
+
95.53
40.74
0
Exon Skipping
187
chr2:225742033-225742219
+
99.54
2.6
1
Exon Skipping
170
chr2:225752233-225752402
+
100
0
1
Exon Skipping
198
chr2:225691088-225691285
+
99.98
0.09
1
Exon Skipping
142
chr2:225654229-225654370
+
99.95
0.15
1
Intron Retention
389
chr2:225767508-225767896
+
3.42
24.6
0
Intron Retention
730
chr2:225775690-225776419
+
10.46
29.55
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000198691 ABCA4 1-to-1
Human hg19 ENSG00000198691 ABCA4 1-to-1
Mouse mm10 ENSMUSG00000028125 Abca4 1-to-1
Mouse mm9 ENSMUSG00000028125 Abca4 1-to-1
Cow bosTau6 ENSBTAG00000018010 ABCA4 1-to-1
Chicken galGal4 ENSGALG00000005752 ABCA4 1-to-1
Chicken galGal3 ENSGALG00000005752 F1N8D7_CHICK 1-to-1
Zebrafish danRer10 ENSDARG00000057169 abca4a 1-to-2
Zebrafish danRer10 ENSDARG00000062661 abca4b 1-to-2